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SCN18_25_8_15_R2_B_scaffold_3840

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3840_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..914
DNA (912bp) protein (304aa)
Plasmid partitioning protein RepA n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRA3_METNO
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KKC31361.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
plasmid partitioning protein RepA
SCN18_25_8_15_R2_B_scaffold_3840_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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911..1924
DNA (1014bp) protein (338aa)
Plasmid partitioning protein RepB n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IRA2_METNO
Uncharacterized protein {ECO:0000313|EMBL:KKB86210.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
plasmid partitioning protein RepB
SCN18_25_8_15_R2_B_scaffold_3840_3
unknown

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1976..2089
DNA (114bp) protein (38aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3840_4
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

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2140..3474
DNA (1335bp) protein (445aa)
UPI0003CE609C related cluster n=1 Tax=unknown RepID=UPI0003CE609C
Replication initiation protein RepC {ECO:0000313|EMBL:KFC70268.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
replication initiation protein RepC
SCN18_25_8_15_R2_B_scaffold_3840_5
scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, Plasmid-like

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3555..3944
DNA (390bp) protein (130aa)
XRE family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003753D05
Uncharacterized protein {ECO:0000313|EMBL:KFC70267.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3840_6
scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, Plasmid-like

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3941..4459
DNA (519bp) protein (173aa)
RES domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIY7_9RHIZ
RES domain protein {ECO:0000313|EMBL:KKB84606.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3840_7
unknown

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4725..4985
DNA (261bp) protein (87aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3840_8
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5059..6243)
DNA (1185bp) protein (395aa)
MFS permease n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AHM1_RHIFH
MFS transporter {ECO:0000313|EMBL:KFL27557.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MFS permease
SCN18_25_8_15_R2_B_scaffold_3840_9
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6270..6929)
DNA (660bp) protein (220aa)
Sulfurtransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU22_9RHIZ
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3840_10
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7016..7780
DNA (765bp) protein (255aa)
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6)
beta-lactamase n=1 Tax=Sphingobium xenophagum RepID=UPI0003681695
Zn-dependent hydrolase {ECO:0000313|EMBL:KFG88978.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
SCN18_25_8_15_R2_B_scaffold_3840_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7777..7947
DNA (171bp) protein (57aa)
Putative transporter component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z4A4_SPHJU
putative transporter component
Putative transporter component {ECO:0000313|EMBL:BAI97436.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
Displaying 11 items

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