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SCN18_25_8_15_R2_B_scaffold_1250

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1250_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..717
DNA (717bp) protein (239aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R981_PELHB
Biopolymer transporter ExbB {ECO:0000313|EMBL:KFL29228.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MotA/TolQ/ExbB proton channel family protein
SCN18_25_8_15_R2_B_scaffold_1250_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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719..1156
DNA (438bp) protein (146aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R980_PELHB
Biopolymer transporter ExbD {ECO:0000313|EMBL:KFL29227.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
biopolymer transport protein ExbD/TolR
SCN18_25_8_15_R2_B_scaffold_1250_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1165..2364
DNA (1200bp) protein (400aa)
serine/threonine protein kinase (EC:2.7.11.1 3.4.24.35)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R979_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76029.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_1250_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2430..3740
DNA (1311bp) protein (437aa)
Protein TolB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R978_PELHB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
TolB protein
SCN18_25_8_15_R2_B_scaffold_1250_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3969..4469
DNA (501bp) protein (167aa)
Outer membrane lipoprotein Omp16 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R977_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29789.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
outer membrane lipoprotein Omp16
SCN18_25_8_15_R2_B_scaffold_1250_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4676..5710
DNA (1035bp) protein (345aa)
TPR repeat containing exported protein, putative periplasmic protein contains a protein prenylyltransferase domain n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R976_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29790.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1250_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5695..6969
DNA (1275bp) protein (425aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R975_PELHB
tRNA(Ile)-lysidine synthetase
SCN18_25_8_15_R2_B_scaffold_1250_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7329..9260
DNA (1932bp) protein (644aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R974_PELHB
cell division protein FtsH
SCN18_25_8_15_R2_B_scaffold_1250_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9373..10716
DNA (1344bp) protein (448aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Phosphoglucosamine mutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R971_PELHB
phosphoglucosamine mutase
SCN18_25_8_15_R2_B_scaffold_1250_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10819..11547
DNA (729bp) protein (243aa)
Putative heat resistant agglutinin 1 protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R970_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29793.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative heat resistant agglutinin 1 protein
SCN18_25_8_15_R2_B_scaffold_1250_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11655..12653
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000373FE2F
NAD-dependent epimerase {ECO:0000313|EMBL:KFL29794.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NAD-dependent epimerase/dehydratase
SCN18_25_8_15_R2_B_scaffold_1250_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12694..13707
DNA (1014bp) protein (338aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003730E28
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1250_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13704..14291)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Acinetobacter pittii RepID=N9G629_ACIPI
Uncharacterized protein {ECO:0000313|EMBL:KFL29796.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dos; cAMP phosphodiesterase, heme-regulated
SCN18_25_8_15_R2_B_scaffold_1250_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14385..15044)
DNA (660bp) protein (220aa)
EAL domain-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN42_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL29796.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1250_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15370..15855
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2I4U2_9RHOB
Copper metallochaperone {ECO:0000313|EMBL:KFC70304.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1250_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15852..16550)
DNA (699bp) protein (233aa)
PA-phosphatase related phosphoesterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF86_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76991.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
PA-phosphatase-like phosphoesterase
SCN18_25_8_15_R2_B_scaffold_1250_17
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16788..19187
DNA (2400bp) protein (800aa)
Glucan 1,4-alpha-glucosidase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M8_AGRVS
Cga {ECO:0000313|EMBL:KFL32410.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glucan 1,4-alpha-glucosidase
SCN18_25_8_15_R2_B_scaffold_1250_18
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..20208
DNA (999bp) protein (333aa)
6-phosphogluconate dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M7_AGRVS
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KFL32409.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
6-phosphogluconate dehydrogenase-like protein
SCN18_25_8_15_R2_B_scaffold_1250_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20205..21620
DNA (1416bp) protein (472aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M6_AGRVS
glucose-6-phosphate 1-dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1250_20
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21610..22287
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5M5_AGRVS
ROK family protein {ECO:0000313|EMBL:KFL32407.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1250_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22284..23177)
DNA (894bp) protein (298aa)
Periplasmic component of the Tol biopolymer transport system n=1 Tax=Rhizobium sp. CF142 RepID=J2B603_9RHIZ
Biopolymer transporter Tol {ECO:0000313|EMBL:KKB78943.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
periplasmic component of the Tol biopolymer transport system
SCN18_25_8_15_R2_B_scaffold_1250_22
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23392..24471)
DNA (1080bp) protein (360aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J1SI02_9RHIZ
ABC transporter {ECO:0000313|EMBL:KFL32194.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glycerol-3-phosphate ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_1250_23
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24483..25751)
DNA (1269bp) protein (423aa)
sorbosone dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI000373E5E9
Sorbosone dehydrogenase {ECO:0000313|EMBL:KFL32193.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
aldehyde dehydrogenase
Displaying 23 items

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