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SCN18_25_8_15_R2_B_scaffold_1251

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1251_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(84..977)
DNA (894bp) protein (298aa)
Putative transcriptional regulator protein, LysR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVP0_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KKB82934.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
LysR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1251_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1107..2384
DNA (1278bp) protein (426aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KKB82843.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KKB82843.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
4-aminobutyrate aminotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN57_XANP2
4-aminobutyrate aminotransferase
SCN18_25_8_15_R2_B_scaffold_1251_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2397..3845
DNA (1449bp) protein (483aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KKB82844.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KKB82844.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
UPI0003CE4EA8 related cluster n=1 Tax=unknown RepID=UPI0003CE4EA8
gabD1; Succinate-semialdehyde dehydrogenase [NADP+] (SSDH)
SCN18_25_8_15_R2_B_scaffold_1251_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4094..4306
DNA (213bp) protein (71aa)
Cold-shock DNA-binding protein family n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28L70_JANSC
Cold-shock protein {ECO:0000313|EMBL:KKB12377.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
cold-shock DNA-binding protein family protein
SCN18_25_8_15_R2_B_scaffold_1251_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4367..7021)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XTT7_PARAH
PQQ-dependent catabolism-associated CXXCW motif protein {ECO:0000313|EMBL:KFC69733.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1251_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7536..9245
DNA (1710bp) protein (570aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUC5_9RHIZ
SCN18_25_8_15_R2_B_scaffold_1251_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9256..11313
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
K+-transporting ATPase subunit B (EC:3.6.3.4)
potassium-transporting ATPase subunit B n=1 Tax=Rhizobium meliloti RepID=UPI000307E71B
SCN18_25_8_15_R2_B_scaffold_1251_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11326..11886
DNA (561bp) protein (187aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Potassium-transporting ATPase C chain n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVT8_9RHIZ
potassium ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_1251_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11888..14545
DNA (2658bp) protein (886aa)
Osmosensitive K+ channel histidine kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQQ4_9RHIZ
Histidine kinase {ECO:0000313|EMBL:KKB08625.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
osmosensitive K+ channel signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_1251_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14542..15225
DNA (684bp) protein (228aa)
Fis family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI00035D26D6
Transcriptional regulator {ECO:0000313|EMBL:KKB08624.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Response regulator
SCN18_25_8_15_R2_B_scaffold_1251_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15317..17377
DNA (2061bp) protein (687aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidase M3A and M3B, thimet/oligopeptidase F n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXW0_9BRAD
Peptidase M3 {ECO:0000313|EMBL:KFL32688.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1251_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17426..19342)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6ASD9_RHILS
Glycosyl hydrolase {ECO:0000313|EMBL:KFL32687.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1251_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19353..20393)
DNA (1041bp) protein (347aa)
transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B5D7A7
Transcriptional regulator {ECO:0000313|EMBL:KFL32686.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative transcriptional regulator PurR
SCN18_25_8_15_R2_B_scaffold_1251_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20699..22048
DNA (1350bp) protein (450aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B6EAB5
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32685.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1251_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22243..23181
DNA (939bp) protein (313aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000382F0B6
ABC transporter permease {ECO:0000313|EMBL:KFL32684.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
maltose ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_1251_16
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23185..24015
DNA (831bp) protein (277aa)
ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B47B97
ABC transporter permease {ECO:0000313|EMBL:KFL32683.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter permease protein
SCN18_25_8_15_R2_B_scaffold_1251_17
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24022..25125
DNA (1104bp) protein (368aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000380F8C5
ABC transporter {ECO:0000313|EMBL:KFL32682.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter, ATP-binding protein, putative
SCN18_25_8_15_R2_B_scaffold_1251_18
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25128..25682
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037AB46A
Uncharacterized protein {ECO:0000313|EMBL:KFL32681.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
PHP C-terminal domain-containing protein
Displaying 18 items

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