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SCN18_25_8_15_R2_B_scaffold_1284

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1284_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..729
DNA (729bp) protein (243aa)
Putative Ribonuclease BN, possibly membrane-associated n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YM02_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKB83726.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
ribonuclease BN
SCN18_25_8_15_R2_B_scaffold_1284_2
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(719..1750)
DNA (1032bp) protein (344aa)
Oxidoreductase-like protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F554_KETVY
Oxidoreductase {ECO:0000313|EMBL:KFL32072.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Oxidoreductase, putative
SCN18_25_8_15_R2_B_scaffold_1284_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1828..4500)
DNA (2673bp) protein (891aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPK1_9RHIZ
Histidine kinase {ECO:0000313|EMBL:KFL32073.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
diguanylate cyclase (GGDEF) domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1284_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4706..5125)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3Z6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32074.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1284_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5126..7579)
DNA (2454bp) protein (818aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Sensor protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F6_PELHB
sensor protein
SCN18_25_8_15_R2_B_scaffold_1284_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7978..9381)
DNA (1404bp) protein (468aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Adenosylhomocysteinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9F7_PELHB
adenosylhomocysteinase
SCN18_25_8_15_R2_B_scaffold_1284_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9471..9977)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003670EA5
Uncharacterized protein {ECO:0000313|EMBL:KFL32078.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1284_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10019..11839)
DNA (1821bp) protein (607aa)
Putative glycosyl transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9I8_PELHB
Putative glycosyl transferase {ECO:0000313|EMBL:KFC61245.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative glycosyl transferase
SCN18_25_8_15_R2_B_scaffold_1284_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11849..12493)
DNA (645bp) protein (215aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Autoinducer synthesis protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KGU2_METEX
msaI; N-acyl-L-homoserine lactone synthetase MsaI
SCN18_25_8_15_R2_B_scaffold_1284_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12717..13502)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Pseudovibrio RepID=G8PLU9_PSEUV
Uncharacterized protein {ECO:0000313|EMBL:KFL32079.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1284_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13543..14544)
DNA (1002bp) protein (334aa)
Chaperone protein Hsp33 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T1_PELHB
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
chaperone protein Hsp33
SCN18_25_8_15_R2_B_scaffold_1284_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14713..15645)
DNA (933bp) protein (311aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Ornithine carbamoyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T0_PELHB
ornithine carbamoyltransferase
SCN18_25_8_15_R2_B_scaffold_1284_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15828..17027)
DNA (1200bp) protein (400aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Acetylornithine aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8S9_PELHB
acetylornithine aminotransferase
SCN18_25_8_15_R2_B_scaffold_1284_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17394..17963
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8S8_PELHB
GcrA cell cycle regulator {ECO:0000313|EMBL:KFL32083.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1284_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18027..18296)
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32084.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_1284_16
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18452..19654)
DNA (1203bp) protein (401aa)
Beta-ketoacyl synthase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPI7_METSB
Uncharacterized protein {ECO:0000313|EMBL:KFL32085.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
beta-ketoacyl synthase
SCN18_25_8_15_R2_B_scaffold_1284_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19651..19995)
DNA (345bp) protein (115aa)
phosphopantetheine-binding protein n=1 Tax=Methylocystis parvus RepID=UPI0003075B0C
Uncharacterized protein {ECO:0000313|EMBL:KJS18038.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
acyl carrier protein
SCN18_25_8_15_R2_B_scaffold_1284_18
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20183..21340)
DNA (1158bp) protein (386aa)
lipase n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI0003718D1A
Lipase {ECO:0000313|EMBL:KFL32086.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1284_19
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21337..21906)
DNA (570bp) protein (190aa)
TetR family transcriptional regulator n=1 Tax=Nocardiopsis potens RepID=UPI00034D1EC1
TetR family transcriptional regulator {ECO:0000313|EMBL:KFL32087.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative TetR-family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1284_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22002..23120)
DNA (1119bp) protein (373aa)
Cyclopropane fatty acyl phospholipid synthase {ECO:0000313|EMBL:KFL32088.1}; EC=2.1.1.79 {ECO:0000313|EMBL:KFL32088.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE50_PELHB
cyclopropane-fatty-acyl-phospholipid synthase
SCN18_25_8_15_R2_B_scaffold_1284_21
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23268..25097
DNA (1830bp) protein (610aa)
DNA polymerase I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBR0_PELHB
DNA polymerase {ECO:0000313|EMBL:KFL32089.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
DNA polymerase I
Displaying 21 items

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