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SCN18_25_8_15_R2_B_scaffold_1308

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1308_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..752)
DNA (750bp) protein (250aa)
5-dehydro-2-deoxygluconokinase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036835E5
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KFL31637.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iolc3; 5-dehydro-2-deoxygluconokinase
SCN18_25_8_15_R2_B_scaffold_1308_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(845..1684)
DNA (840bp) protein (280aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MCX7_RHISN
RpiR family transcriptional regulator {ECO:0000313|EMBL:KFL31638.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1308_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1813..2784)
DNA (972bp) protein (324aa)
Integral membrane protein DUF6 n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAI2_9CAUL
Membrane protein {ECO:0000313|EMBL:KFL31639.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative transmembrane protein
SCN18_25_8_15_R2_B_scaffold_1308_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3207..5210)
DNA (2004bp) protein (668aa)
Oxidoreductase domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD81_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:KFL31640.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1308_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5373..6284
DNA (912bp) protein (304aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLG4_MESAW
AraC family transcriptional regulator {ECO:0000313|EMBL:KKB81058.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
DNA-binding domain-containing protein, AraC-type
SCN18_25_8_15_R2_B_scaffold_1308_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6296..8398
DNA (2103bp) protein (701aa)
Transmembrane adenylate/guanylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJM6_9RHIZ
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:KFC71038.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cyaD2; adenylate cyclase
SCN18_25_8_15_R2_B_scaffold_1308_7
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8395..9087)
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FC7_MESSB
GntR family transcriptional regulator {ECO:0000313|EMBL:KFL31641.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
GntR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1308_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9181..10701)
DNA (1521bp) protein (507aa)
MmgE/PrpD n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FC9_MESSB
2-methylcitrate dehydratase {ECO:0000313|EMBL:KFL31642.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MmgE/PrpD
SCN18_25_8_15_R2_B_scaffold_1308_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10757..12244)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FD0_MESSB
Tripartite tricarboxylate transporter TctA {ECO:0000313|EMBL:KFL31643.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1308_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12248..12775)
DNA (528bp) protein (176aa)
Integral membrane protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FD1_MESSB
Membrane protein {ECO:0000313|EMBL:KFL31644.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
integral membrane protein
SCN18_25_8_15_R2_B_scaffold_1308_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12765..13721)
DNA (957bp) protein (319aa)
Uncharacterized protein UPF0065 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FD2_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KFL31645.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1308_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14077..15735
DNA (1659bp) protein (553aa)
Sodium/hydrogen exchanger n=1 Tax=Williamsia sp. D3 RepID=V8CXT6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFL31646.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
NhaP-type Na+(K+)/H+ antiporter
SCN18_25_8_15_R2_B_scaffold_1308_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15732..16766)
DNA (1035bp) protein (345aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2N6_AGRVS
ABC transporter
SCN18_25_8_15_R2_B_scaffold_1308_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16769..18346)
DNA (1578bp) protein (526aa)
Fe(3+)-transport system permease protein sfuB n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EZY4_9RHIZ
Iron ABC transporter permease {ECO:0000313|EMBL:KFL31648.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1308_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18358..19359)
DNA (1002bp) protein (334aa)
Family 1 extracellular solute-binding protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PWJ2_9RHIZ
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31649.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1308_16
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19503..20765
DNA (1263bp) protein (421aa)
peptidase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EA841
Peptidase {ECO:0000313|EMBL:KFL31650.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative iron-regulated protein
SCN18_25_8_15_R2_B_scaffold_1308_17
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20910..22421
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DGV8_9RHIZ
Thiol oxidoreductase {ECO:0000313|EMBL:KFL31651.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
thiol oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1308_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22421..23467
DNA (1047bp) protein (349aa)
Peptidase M75, Imelysin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKD9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31652.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Putative periplasmic lipoprotein
SCN18_25_8_15_R2_B_scaffold_1308_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23470..24561
DNA (1092bp) protein (364aa)
Mlr5529 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BK7_RHILO
Uncharacterized protein {ECO:0000313|EMBL:KFL31653.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
Displaying 19 items

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