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SCN18_25_8_15_R2_B_scaffold_1940

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1940_1
unknown

Not on your lists

2..121
DNA (120bp) protein (40aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_2
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121..735
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDY8_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50782.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1940_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

732..1109
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU40190.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1940_4
unknown

Not on your lists

1111..1380
DNA (270bp) protein (90aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_5
unknown

Not on your lists

1373..1861
DNA (489bp) protein (163aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_6
unknown

Not on your lists

1858..2067
DNA (210bp) protein (70aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_7
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2064..2729
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDF1_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50777.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1940_8
unknown

Not on your lists

2739..3071
DNA (333bp) protein (111aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_9
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3071..3502
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-B RepID=R9U4A4_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KFL27054.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_10
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3499..4053
DNA (555bp) protein (185aa)
SCN18_25_8_15_R2_B_scaffold_1940_11
unknown

Not on your lists

4050..4322
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_12
unknown

Not on your lists

4319..4588
DNA (270bp) protein (90aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_13
unknown

Not on your lists

4585..4839
DNA (255bp) protein (85aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4836..5411
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D2121
Uncharacterized protein {ECO:0000313|EMBL:CDP54048.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_15
SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, SCNPILOT_EXPT_750_BF_Plasmid_64_137, Plasmid-like

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5411..5755
DNA (345bp) protein (115aa)
DNA, contig: SP630 {ECO:0000313|EMBL:GAN14133.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCN18_25_8_15_R2_B_scaffold_1940_16
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5759..6148
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WG48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDP54050.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_17
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6298..7218
DNA (921bp) protein (307aa)
Lysozyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDE4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP54051.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
phage-related lysozyme
SCN18_25_8_15_R2_B_scaffold_1940_18
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7246..7770
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=dsDNA viruses, no RNA stage RepID=M4SNP1_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:CDP54052.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_19
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7770..8159
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDE0_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50766.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1940_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8156..8476
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7M9_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF88138.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_25_8_15_R2_B_scaffold_1940_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8480..9049
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000363BB0F
Mu-like phage gp27
Mu-like phage gp27 {ECO:0000313|EMBL:AEQ50764.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1940_22
unknown

Not on your lists

9046..9318
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1940_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9315..9506
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U381_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KJC09697.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9503..11215
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI000255865A
Phage protein {ECO:0000313|EMBL:CDN93433.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11215..12822
DNA (1608bp) protein (536aa)
UPI0003CE4354 related cluster n=1 Tax=unknown RepID=UPI0003CE4354
Uncharacterized protein {ECO:0000313|EMBL:CDX19858.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_26
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

12822..14036
DNA (1215bp) protein (405aa)
Prophage MuSo2 F protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYD7_AGRVS
prophage MuSo2 F protein
Prophage MuSo2 F protein {ECO:0000313|EMBL:ACM37167.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCN18_25_8_15_R2_B_scaffold_1940_27
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14236..15396
DNA (1161bp) protein (387aa)
UPI0003CE70A0 related cluster n=1 Tax=unknown RepID=UPI0003CE70A0
Uncharacterized protein {ECO:0000313|EMBL:ESY52754.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
I protein
SCN18_25_8_15_R2_B_scaffold_1940_28
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15405..15791
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WG36_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ96343.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_29
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15806..16231
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bartonella vinsonii subsp. berkhoffii str. Tweed RepID=N6UQR1_BARVB
Capsid protein {ECO:0000313|EMBL:ETR79289.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1940_30
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16176..16541
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WG35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ96342.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
Displaying 30 items

View Taxonomy