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SCN18_25_8_15_R2_B_scaffold_1998

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1998_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1447
DNA (1446bp) protein (482aa)
UbiA prenyltransferase n=1 Tax=Brucella inopinata BO1 RepID=E0DRR5_9RHIZ
UbiA prenyltransferase {ECO:0000313|EMBL:KFL29960.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1998_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1447..2784
DNA (1338bp) protein (446aa)
Oxidoreductase, FAD-binding n=55 Tax=Brucella RepID=A5VVD5_BRUO2
FAD-linked oxidase {ECO:0000313|EMBL:KFL29961.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Oxidoreductase, FAD-binding
SCN18_25_8_15_R2_B_scaffold_1998_3
unknown

Not on your lists

comp(2798..2977)
DNA (180bp) protein (60aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1998_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3320..4330
DNA (1011bp) protein (337aa)
Epimerase/dehydratase family protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P925_9RHIZ
NAD-dependent dehydratase {ECO:0000313|EMBL:KFL29963.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
epimerase/dehydratase family protein
SCN18_25_8_15_R2_B_scaffold_1998_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4342..5787
DNA (1446bp) protein (482aa)
Class III aminotransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QR31_9RHIZ
Aminotransferase class III {ECO:0000313|EMBL:KFL29964.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
class III aminotransferase
SCN18_25_8_15_R2_B_scaffold_1998_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5811..7031
DNA (1221bp) protein (407aa)
UPI0003D003BB related cluster n=1 Tax=unknown RepID=UPI0003D003BB
Uncharacterized protein {ECO:0000313|EMBL:KJS21034.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1998_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7846..8625
DNA (780bp) protein (260aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
polyprenyl glycosylphosphotransferase n=1 Tax=Methylocystis parvus RepID=UPI0002E2F693
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase {ECO:0000313|EMBL:CEJ14421.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCN18_25_8_15_R2_B_scaffold_1998_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8710..10362
DNA (1653bp) protein (551aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB78258.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_1998_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10430..11791
DNA (1362bp) protein (454aa)
Glutamine synthetase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FT53_RHIML
Glutamine synthetase {ECO:0000313|EMBL:KKB78255.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glutamine synthetase
SCN18_25_8_15_R2_B_scaffold_1998_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11791..13095
DNA (1305bp) protein (435aa)
Gamma-glutamylputrescine oxidoreductase PuuB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMX6_9RHIZ
Gamma-glutamylputrescine oxidoreductase {ECO:0000313|EMBL:KKB78254.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
puuB; putative gamma-glutamylputrescine oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1998_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13092..13451)
DNA (360bp) protein (120aa)
PhaG monovalent cation/H+ antiporter subunit G n=1 Tax=uncultured organism RepID=D8VMX5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFL29969.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phaG; ph adaptation potassium efflux system protein G
SCN18_25_8_15_R2_B_scaffold_1998_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13448..13729)
DNA (282bp) protein (94aa)
PhaF monovalent cation/H+ antiporter subunit F n=1 Tax=uncultured organism RepID=D8VMX6_9ZZZZ
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KFL29970.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phaF; monovalent cation/H+ antiporter subunit F
SCN18_25_8_15_R2_B_scaffold_1998_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13726..14211)
DNA (486bp) protein (162aa)
PhaE monovalent cation/H+ antiporter subunit E n=1 Tax=uncultured organism RepID=D8VMX7_9ZZZZ
Monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:KFL29971.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cation antiporter
SCN18_25_8_15_R2_B_scaffold_1998_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14208..15806)
DNA (1599bp) protein (533aa)
NADH-ubiquinone/plastoquinone (Complex I) n=1 Tax=uncultured organism RepID=D8VMX8_9ZZZZ
Monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:KFL29972.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phaD; K+/H+ antiporter subunit D
SCN18_25_8_15_R2_B_scaffold_1998_15
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15808..16143)
DNA (336bp) protein (112aa)
NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=uncultured organism RepID=D8VMX9_9ZZZZ
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KFL29973.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
monovalent cation/H+ antiporter subunit C
SCN18_25_8_15_R2_B_scaffold_1998_16
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16134..19064)
DNA (2931bp) protein (977aa)
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=uncultured organism RepID=D8VMY0_9ZZZZ
Monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:KKB10246.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative monovalent cation/H+ antiporter subunit A
SCN18_25_8_15_R2_B_scaffold_1998_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19188..20018)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035DCB6F
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KFL29974.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phnE; putative PhnE protein, phosphonate ABC transporter membrane protein
SCN18_25_8_15_R2_B_scaffold_1998_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20022..20933)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C5C19
Uncharacterized protein {ECO:0000313|EMBL:KFL29975.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate ABC transporter inner membrane subunit
SCN18_25_8_15_R2_B_scaffold_1998_19
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20993..21913)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003643305
Uncharacterized protein {ECO:0000313|EMBL:KFL29976.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate ABC transporter periplasmic phosphonate binding protein
SCN18_25_8_15_R2_B_scaffold_1998_20
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..22762)
DNA (816bp) protein (272aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003801ED2
phosphonate/organophosphate ester transporter subunit
SCN18_25_8_15_R2_B_scaffold_1998_21
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22818..23774)
DNA (957bp) protein (319aa)
Phosphonate metabolism protein PhnM n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QFT3_9RHIZ
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:KFL29978.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1998_22
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23782..24012)
DNA (231bp) protein (77aa)
Phosphonate metabolism protein PhnM n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QFT3_9RHIZ
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:KFL29978.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1998_23
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23999..24730)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003713D7C
Phosphonate metabolism protein PhnL {ECO:0000313|EMBL:KFL29979.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate C-P lyase system protein, PhnL
SCN18_25_8_15_R2_B_scaffold_1998_24
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24740..25561)
DNA (822bp) protein (274aa)
ABC-type phosphonate transport system, ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J2K842_9RHIZ
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:KFL29980.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter-like protein
SCN18_25_8_15_R2_B_scaffold_1998_25
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25558..26472)
DNA (915bp) protein (305aa)
Carbon-phosphorus lyase complex subunit PhnJ n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PGB2_9RHIZ
Carbon-phosphorus lyase complex subunit PhnJ {ECO:0000313|EMBL:KFL29981.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
carbon-phosphorus lyase complex subunit PhnJ
SCN18_25_8_15_R2_B_scaffold_1998_26
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26469..27554)
DNA (1086bp) protein (362aa)
Carbon-phosphorus lyase complex subunit PhnI n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QX30_9RHIZ
Phosphonate metabolism protein PhnI {ECO:0000313|EMBL:KFL29982.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
carbon-phosphorus lyase complex subunit PhnI
SCN18_25_8_15_R2_B_scaffold_1998_27
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27554..28093)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000364FDAD
Uncharacterized protein {ECO:0000313|EMBL:KFL29983.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate metabolism protein PhnH
SCN18_25_8_15_R2_B_scaffold_1998_28
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28093..28536)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V675_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL29984.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphonate metabolism protein PhnG
SCN18_25_8_15_R2_B_scaffold_1998_29
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28529..29284)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037EC278
Uncharacterized protein {ECO:0000313|EMBL:KFL29985.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator, GntR family protein
SCN18_25_8_15_R2_B_scaffold_1998_30
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29394..31292)
DNA (1899bp) protein (633aa)
Putative chemotaxis transducer n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R699_PELHB
Putative chemotaxis transducer {ECO:0000313|EMBL:KFC68425.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative chemotaxis transducer
Displaying 30 items

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