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SCN18_25_8_15_R2_B_scaffold_2242

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2242_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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210..1730
DNA (1521bp) protein (507aa)
ABC transporter substrate binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXT4_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32741.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter, substrate binding protein
SCN18_25_8_15_R2_B_scaffold_2242_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1793..2752
DNA (960bp) protein (320aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2JMC6_9RHIZ
Glutathione ABC transporter permease {ECO:0000313|EMBL:KFL32742.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Binding-protein-dependent transport system inner membrane component family protein 31
SCN18_25_8_15_R2_B_scaffold_2242_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2752..3594
DNA (843bp) protein (281aa)
glutathione ABC transporter permease GsiD n=1 Tax=Martelella mediterranea RepID=UPI0003673FD3
Diguanylate cyclase {ECO:0000313|EMBL:KFL32743.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
diguanylate cyclase
SCN18_25_8_15_R2_B_scaffold_2242_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3591..5321
DNA (1731bp) protein (577aa)
UPI0003CE3B34 related cluster n=1 Tax=unknown RepID=UPI0003CE3B34
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32744.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_2242_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5318..6310
DNA (993bp) protein (331aa)
UPI0003CE8CF7 related cluster n=1 Tax=unknown RepID=UPI0003CE8CF7
Esterase {ECO:0000313|EMBL:KFL32745.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
esterase
SCN18_25_8_15_R2_B_scaffold_2242_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6316..7440
DNA (1125bp) protein (375aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Nitratireductor indicus C115 RepID=K2N094_9RHIZ
anhydro-N-acetylmuramic acid kinase
SCN18_25_8_15_R2_B_scaffold_2242_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7443..7862
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C1C72
Acetyltransferase {ECO:0000313|EMBL:KFL32747.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetyltransferase protein
SCN18_25_8_15_R2_B_scaffold_2242_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7863..8738
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003813C6B
Uncharacterized protein {ECO:0000313|EMBL:KFL32748.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2242_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8788..9582)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003772F66
Uncharacterized protein {ECO:0000313|EMBL:KFL29580.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
uncharacterized protein containing SIS (sugar ISomerase) phosphosugar binding domain
SCN18_25_8_15_R2_B_scaffold_2242_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9601..10350)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003799366
GntR family transcriptional regulator {ECO:0000313|EMBL:KFL29579.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2242_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10347..11222)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A338D
ROK family transcriptional regulator {ECO:0000313|EMBL:KFL30674.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator/sugar kinase
SCN18_25_8_15_R2_B_scaffold_2242_12
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11219..12076)
DNA (858bp) protein (286aa)
ABC-type sugar transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLD9_MESAW
ABC transporter permease {ECO:0000313|EMBL:KFL30673.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type sugar transport system, permease component
SCN18_25_8_15_R2_B_scaffold_2242_13
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12073..12966)
DNA (894bp) protein (298aa)
ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3I4_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KFL30672.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
permease component of ABC-type sugar transporter
SCN18_25_8_15_R2_B_scaffold_2242_14
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13030..14148)
DNA (1119bp) protein (373aa)
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003795046
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL30671.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type sugar transport system, periplasmic component
Displaying 14 items

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