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SCN18_25_8_15_R2_B_scaffold_2255

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2255_1
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..394)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EE00_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KKB83245.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
probable phage protein YPO2110
SCN18_25_8_15_R2_B_scaffold_2255_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(504..1280)
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB83244.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1378..1809
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09397.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCN18_25_8_15_R2_B_scaffold_2255_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1862..2272)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002DA21C7
Uncharacterized protein {ECO:0000313|EMBL:GAM98548.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_5
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2405..3841)
DNA (1437bp) protein (479aa)
62 kDa structural protein n=1 Tax=Phage phiJL001 RepID=Q5DN45_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKB83236.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_6
scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, scnpilot_dereplicated_Plasmid_Chlamydiales_1, Plasmid-like

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comp(3841..5256)
DNA (1416bp) protein (472aa)
terminase n=1 Tax=Rhizobium phaseoli RepID=UPI00036F5A23
Terminase-like family protein {ECO:0000313|EMBL:AID29237.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_7
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5243..5707)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0002E325AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55707.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCN18_25_8_15_R2_B_scaffold_2255_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5741..6109
DNA (369bp) protein (123aa)
Strain MEJ076 contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ05034.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCN18_25_8_15_R2_B_scaffold_2255_9
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6112..6726)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI00035F891F
Uncharacterized protein {ECO:0000313|EMBL:KKB09393.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6870..7205
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A608A
Membrane protein {ECO:0000313|EMBL:KKC37264.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
putative transmembrane protein
SCN18_25_8_15_R2_B_scaffold_2255_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7286..7801)
DNA (516bp) protein (172aa)
GCN5-related N-acetyltransferase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZSE7_RHILW
Uncharacterized protein {ECO:0000313|EMBL:KKC39525.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
N-acetyltransferase GCN5
SCN18_25_8_15_R2_B_scaffold_2255_12
unknown

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8140..8373
DNA (234bp) protein (78aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2255_13
unknown

Not on your lists

comp(8477..8761)
DNA (285bp) protein (95aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2255_14
unknown

Not on your lists

9044..9835
DNA (792bp) protein (264aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2255_15
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9868..10446)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000289D097
Uncharacterized protein {ECO:0000313|EMBL:KFC62762.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2255_16
unknown

Not on your lists

comp(10439..10648)
DNA (210bp) protein (70aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2255_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10645..11523)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI00037B4F8E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55715.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCN18_25_8_15_R2_B_scaffold_2255_18
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(11520..12002)
DNA (483bp) protein (161aa)
Chromosomal replication initiator DnaA domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILN1_XANP2
Uncharacterized protein {ECO:0000313|EMBL:KKC39533.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
chromosomal replication initiator DnaA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2255_19
unknown

Not on your lists

comp(11999..12124)
DNA (126bp) protein (42aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2255_20
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12121..12342)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB83223.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCN18_25_8_15_R2_B_scaffold_2255_21
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12335..12808)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB83222.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCN18_25_8_15_R2_B_scaffold_2255_22
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12805..14061)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI00036844BD
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:ELT50256.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
C-5 cytosine-specific DNA methylase family protein
Displaying 22 items

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