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SCN18_25_8_15_R2_B_scaffold_2298

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2298_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..424)
DNA (423bp) protein (141aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R614_PELHB
dihydrodipicolinate synthase
SCN18_25_8_15_R2_B_scaffold_2298_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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653..1597
DNA (945bp) protein (315aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R612_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31594.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alpha/beta hydrolase
SCN18_25_8_15_R2_B_scaffold_2298_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1600..2988)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZN7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB85738.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
OmpA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2298_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3209..4654)
DNA (1446bp) protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB81098.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative outer membrane protein
SCN18_25_8_15_R2_B_scaffold_2298_5
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5057..5797
DNA (741bp) protein (247aa)
Short-chain dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSE3_AZOC5
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KFL31592.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2298_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5858..7018)
DNA (1161bp) protein (387aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA08_9RHIZ
N-acetylglucosamine-6-phosphate deacetylase
SCN18_25_8_15_R2_B_scaffold_2298_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7015..8043)
DNA (1029bp) protein (343aa)
UPI0003D00131 related cluster n=1 Tax=unknown RepID=UPI0003D00131
Aminotransferase {ECO:0000313|EMBL:KFL31590.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glucosamine-6-phosphate deaminase
SCN18_25_8_15_R2_B_scaffold_2298_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8040..8828)
DNA (789bp) protein (263aa)
UPI0003CEF4D5 related cluster n=1 Tax=unknown RepID=UPI0003CEF4D5
Phage tail protein {ECO:0000313|EMBL:KFL31589.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2298_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9078..9974
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376D1A3
Acetylmuramic acid-6-phosphate etherase {ECO:0000313|EMBL:KFL31588.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative sugar phosphate isomerase
SCN18_25_8_15_R2_B_scaffold_2298_10
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10126..12582)
DNA (2457bp) protein (819aa)
beta-mannosidase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CE629
Beta-mannosidase {ECO:0000313|EMBL:KFL31587.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
manB; mannosidase
SCN18_25_8_15_R2_B_scaffold_2298_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12688..13164
DNA (477bp) protein (159aa)
Putative glutathione S-transferase-related transmembrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCL6_PELHB
Polyketide cyclase {ECO:0000313|EMBL:KKB81103.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative glutathione S-transferase-related transmembrane protein
SCN18_25_8_15_R2_B_scaffold_2298_12
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13258..13830)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=gamma proteobacterium WG36 RepID=UPI00036B3AE1
Uncharacterized protein {ECO:0000313|EMBL:KFL31585.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acetyltransferase
Displaying 12 items

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