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SCN18_25_8_15_R2_B_scaffold_2322

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2322_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..235
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IXL7_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KFL32385.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232..534
DNA (303bp) protein (101aa)
FlhB-related protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLW4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB77414.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
type III secretion proteins, related to flagellar biosynthesis protein FlhB
SCN18_25_8_15_R2_B_scaffold_2322_3
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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615..1166
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I213_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL32386.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1251..1721)
DNA (471bp) protein (157aa)
Spore-cortex-lytic enzyme prepeptide n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDH8_PELHB
Spore-cortex-lytic enzyme prepeptide {ECO:0000313|EMBL:KKB77416.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
spore-cortex-lytic enzyme prepeptide
SCN18_25_8_15_R2_B_scaffold_2322_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1814..2140)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL32387.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCN18_25_8_15_R2_B_scaffold_2322_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2257..2580
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKS2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KFL32388.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2577..3185)
DNA (609bp) protein (203aa)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:KKB77419.1}; EC=3.2.2.9 {ECO:0000313|EMBL:KKB77419.1};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQX1_RHIRD
SCN18_25_8_15_R2_B_scaffold_2322_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3365..3655
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000361C6AC
Uncharacterized protein {ECO:0000313|EMBL:KFL32389.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3725..3907)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Rhodobacter sphaeroides RepID=B9KWB7_RHOSK
Uncharacterized protein {ECO:0000313|EMBL:KKB77420.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_10
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4038..4637)
DNA (600bp) protein (200aa)
Putative transmembrane protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XFJ7_RHIFR
transmembrane protein
Membrane protein {ECO:0000313|EMBL:KDP70656.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCN18_25_8_15_R2_B_scaffold_2322_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4868..6715)
DNA (1848bp) protein (616aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09465.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCN18_25_8_15_R2_B_scaffold_2322_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6712..7743)
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09466.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCN18_25_8_15_R2_B_scaffold_2322_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7740..9962)
DNA (2223bp) protein (741aa)
Integrase, catalytic domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW59_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB09467.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
integrase catalytic subunit
SCN18_25_8_15_R2_B_scaffold_2322_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10056..10847)
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09468.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCN18_25_8_15_R2_B_scaffold_2322_15
unknown

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comp(10964..11359)
DNA (396bp) protein (132aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2322_16
unknown

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comp(11538..11861)
DNA (324bp) protein (108aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2322_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12288..14303)
DNA (2016bp) protein (672aa)
ATP-dependent Zn protease n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YAC8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL25500.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
AAA ATPase, central region
SCN18_25_8_15_R2_B_scaffold_2322_18
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14305..14610)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L3I6_METC4
Uncharacterized protein {ECO:0000313|EMBL:CDP53011.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_19
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14620..15204)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL25501.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCN18_25_8_15_R2_B_scaffold_2322_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15433..15678
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q266_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFL25502.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2322_21
unknown

Not on your lists

comp(15591..16172)
DNA (582bp) protein (194aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2322_22
scnpilot_dereplicated_Plasmid_unknown_2, scnpilot_dereplicated_Plasmid_unknown_2, scnpilot_dereplicated_Plasmid_unknown_2, scnpilot_dereplicated_Plasmid_unknown_2, scnpilot_dereplicated_Plasmid_unknown_2, Plasmid-like

Not on your lists

16509..17555
DNA (1047bp) protein (349aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
DNA-cytosine methyltransferase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HHF8_9RHIZ
putative site-specific DNA methylase
SCN18_25_8_15_R2_B_scaffold_2322_23
SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, Bacteroidetes, Bacteria

Not on your lists

comp(17558..19138)
DNA (1581bp) protein (527aa)
AAA ATPase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z694_DESAT
AAA ATPase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SCN18_25_8_15_R2_B_scaffold_2322_24
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(19104..20267)
DNA (1164bp) protein (388aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034BB03F
ATP-dependent DNA helicase UvrD/PcrA
Displaying 24 items

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