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SCN18_25_8_15_R2_B_scaffold_2730

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2730_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..625
DNA (624bp) protein (208aa)
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CD80_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL31714.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutamate aspartate periplasmic binding protein GltI
SCN18_25_8_15_R2_B_scaffold_2730_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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734..2272
DNA (1539bp) protein (513aa)
Glutamate/glutamine/aspartate/asparagine transport system permease protein bztB n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YJZ0_9RHOB
Amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KFC69960.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
binding-protein-dependent transport systems inner membrane component
SCN18_25_8_15_R2_B_scaffold_2730_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2283..3410
DNA (1128bp) protein (376aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KJ20_9RHIZ
Amino acid ABC transporter permease {ECO:0000313|EMBL:KFL31716.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_25_8_15_R2_B_scaffold_2730_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3415..4215
DNA (801bp) protein (267aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R835_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL31717.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
polar amino acid ABC transporter ATPase
SCN18_25_8_15_R2_B_scaffold_2730_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4309..5334
DNA (1026bp) protein (342aa)
ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R836_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31718.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutamate/glutamine/aspartate/asparagine ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_2730_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5331..6044)
DNA (714bp) protein (238aa)
Ala-tRNA(Pro) hydrolase n=2 Tax=Labrenzia RepID=U7GL51_9RHOB
Ala-tRNA(Pro) hydrolase {ECO:0000313|EMBL:KKB80899.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
alaS2; alanyl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_2730_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6053..7504)
DNA (1452bp) protein (484aa)
Cardiolipin synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R837_PELHB
Cardiolipin synthase {ECO:0000313|EMBL:KFL31719.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Cardiolipin synthetase
SCN18_25_8_15_R2_B_scaffold_2730_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7738..8433
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L9A2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29619.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2730_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8452..9501)
DNA (1050bp) protein (350aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R838_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31369.1}; Flags: Fragment;; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Cysteine synthase
SCN18_25_8_15_R2_B_scaffold_2730_10
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9654..11066)
DNA (1413bp) protein (471aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Ochrobactrum anthropi RepID=UPI000288330B
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KFL31370.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
FAD binding domain of DNA photolyase family protein
SCN18_25_8_15_R2_B_scaffold_2730_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11116..11427)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R844_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31371.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
Displaying 11 items

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