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SCN18_25_8_15_R2_B_scaffold_2885

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2885_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..363)
DNA (363bp) protein (121aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Cysteine desulfurase, SufS subfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAJ8_PELHB
cysteine desulfurase
SCN18_25_8_15_R2_B_scaffold_2885_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(543..1751)
DNA (1209bp) protein (403aa)
Iron-sulfur cluster assembly protein SufD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAJ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32398.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron-sulfur cluster assembly protein SufD
SCN18_25_8_15_R2_B_scaffold_2885_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1758..2519)
DNA (762bp) protein (254aa)
Iron-sulfur cluster assembly ATPase protein SufC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAK0_PELHB
Cysteine desulfurase {ECO:0000313|EMBL:KFL32397.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron-sulfur cluster assembly ATPase protein SufC
SCN18_25_8_15_R2_B_scaffold_2885_4
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2558..3061)
DNA (504bp) protein (168aa)
cupin n=1 Tax=Rhizobium leguminosarum RepID=UPI0003795E1D
Uncharacterized protein {ECO:0000313|EMBL:KFL32396.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cupin
SCN18_25_8_15_R2_B_scaffold_2885_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3063..4592)
DNA (1530bp) protein (510aa)
Iron-sulfur cluster assembly protein SufB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAK2_PELHB
Cysteine desulfurase {ECO:0000313|EMBL:KFL32395.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron-sulfur cluster assembly protein SufB
SCN18_25_8_15_R2_B_scaffold_2885_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4656..5801)
DNA (1146bp) protein (382aa)
Cysteine desulfurase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAK3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32394.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
cysteine desulfurase
SCN18_25_8_15_R2_B_scaffold_2885_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6085..6747
DNA (663bp) protein (221aa)
Alpha/beta hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAK4_PELHB
Alpha/beta hydrolase {ECO:0000313|EMBL:KKB77434.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
alpha/beta hydrolase
SCN18_25_8_15_R2_B_scaffold_2885_8
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6917..8167
DNA (1251bp) protein (417aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
PREDICTED: probable tyrosine--tRNA ligase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18610
SCN18_25_8_15_R2_B_scaffold_2885_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..10899)
DNA (2595bp) protein (865aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAK6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB77432.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
Displaying 9 items

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