ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2905

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2905_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T5_PELHB
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:KFL31039.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase
SCN18_25_8_15_R2_B_scaffold_2905_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1874
DNA (1104bp) protein (368aa)
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KFL31040.1}; EC=3.5.4.13 {ECO:0000313|EMBL:KFL31040.1};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8T6_PELHB
deoxycytidine triphosphate deaminase
SCN18_25_8_15_R2_B_scaffold_2905_3
SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, SCNpilot_BF_INOC_Flavobacteriales_40_20, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1966..4755)
DNA (2790bp) protein (930aa)
aconitate hydratase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036E79B8
Aconitate hydratase {ECO:0000313|EMBL:KFL32933.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
SCN18_25_8_15_R2_B_scaffold_2905_trna_1
unknown

Not on your lists

5080..5150
DNA (71bp)
transferRNA Gly
SCN18_25_8_15_R2_B_scaffold_2905_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5203..5694)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB82552.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_2905_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5895..6935
DNA (1041bp) protein (347aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2KVJ9_9RHIZ
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC39296.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
putative sugar ABC transporter, ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_2905_6
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6991..8967
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV17_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB83458.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
tetratricopeptide repeat-containing protein
SCN18_25_8_15_R2_B_scaffold_2905_7
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8964..10055)
DNA (1092bp) protein (364aa)
ATPase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7635B
Uncharacterized protein {ECO:0000313|EMBL:KKC39298.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2905_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10135..10836
DNA (702bp) protein (234aa)
sugar isomerase n=1 Tax=Humibacter albus RepID=UPI0003B6FE19
Uncharacterized protein {ECO:0000313|EMBL:KKB83456.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
transcriptional regulator, RpiR family
Displaying 9 items

View Taxonomy