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SCN18_25_8_15_R2_B_scaffold_2960

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2960_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..426)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0C1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFL29862.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2960_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(453..2495)
DNA (2043bp) protein (681aa)
von Willebrand factor type A domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R923_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29861.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
von Willebrand factor A
SCN18_25_8_15_R2_B_scaffold_2960_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2492..3061)
DNA (570bp) protein (190aa)
Putative RNA polymerase sigma factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R924_PELHB
RNA polymerase sigma70 {ECO:0000313|EMBL:KFL29860.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative RNA polymerase sigma factor
SCN18_25_8_15_R2_B_scaffold_2960_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3155..3337
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB75976.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_2960_5
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3527..4678)
DNA (1152bp) protein (384aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R926_PELHB
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
SCN18_25_8_15_R2_B_scaffold_2960_6
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4962..6368
DNA (1407bp) protein (469aa)
Flagellar hook-length control protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R927_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29859.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flagellar hook-length control protein
SCN18_25_8_15_R2_B_scaffold_2960_7
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6381..7052
DNA (672bp) protein (224aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R928_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29858.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flagellar basal body rod modification protein FlgD
SCN18_25_8_15_R2_B_scaffold_2960_8
unknown

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comp(7059..7190)
DNA (132bp) protein (44aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_2960_9
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..7643
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R929_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07445.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2960_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7738..8358)
DNA (621bp) protein (207aa)
Glutathione S-transferase n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4Y0B0_9PSED
Glutathione S-transferase {ECO:0000313|EMBL:KFL29854.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
glutathione S-transferase
SCN18_25_8_15_R2_B_scaffold_2960_11
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8510..10159
DNA (1650bp) protein (550aa)
Flagellar M-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R930_PELHB
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flagellar M-ring protein FliF
SCN18_25_8_15_R2_B_scaffold_2960_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10166..10606
DNA (441bp) protein (147aa)
Flagellar motor switch protein FliG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R931_PELHB
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flagellar motor switch protein FliG
Displaying 12 items

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