ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4331

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4331_1
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..349)
DNA (348bp) protein (116aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J3K1_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KKB85701.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
N-acetyltransferase GCN5
SCN18_25_8_15_R2_B_scaffold_4331_2
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(467..733)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGZ7_PELHB
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
50S ribosomal protein L27
SCN18_25_8_15_R2_B_scaffold_4331_3
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(746..1258)
DNA (513bp) protein (171aa)
UPI0003CE1178 related cluster n=1 Tax=unknown RepID=UPI0003CE1178
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ribosomal protein L21
SCN18_25_8_15_R2_B_scaffold_4331_4
SCNPILOT_EXPT_1000_BF_Devosia_62_26, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1482..2261)
DNA (780bp) protein (260aa)
beta-lactamase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B6283E
Uncharacterized protein {ECO:0000313|EMBL:KFL30280.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
beta-lactamase fold Zn-dependent hydrolase
SCN18_25_8_15_R2_B_scaffold_4331_trna_1
unknown

Not on your lists

2484..2570
DNA (87bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_4331_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2898..4118
DNA (1221bp) protein (407aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YG75_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EHH09256.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4331_6
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

comp(4458..5594)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI000363D36B
cysteine desulfurase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_25_8_15_R2_B_scaffold_4331_7
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5749..6765
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037ADC99
DNA sulfur modification protein DndB {ECO:0000313|EMBL:EJL35686.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
DNA sulfur modification protein DndB
SCN18_25_8_15_R2_B_scaffold_4331_8
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6755..7024
DNA (270bp) protein (90aa)
Putative sulfurtransferase DndC n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXC5_9GAMM
sulfurtransferase DndC
Putative sulfurtransferase DndC {ECO:0000313|EMBL:AGA91423.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
Displaying 9 items

View Taxonomy