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SCN18_25_8_15_R2_B_scaffold_4400

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4400_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1145)
DNA (1143bp) protein (381aa)
EAL domain n=1 Tax=uncultured organism RepID=T1W856_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08205.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
diguanylate cyclase/phosphodiesterase
SCN18_25_8_15_R2_B_scaffold_4400_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1247..2140)
DNA (894bp) protein (298aa)
Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. RepID=L0NI07_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KKB85107.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_4400_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2324..3559
DNA (1236bp) protein (412aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhizobium sp. RepID=L0NKC5_RHISP
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KFL32038.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative branched-chain amino acid ABC transporter, substrate-binding component
SCN18_25_8_15_R2_B_scaffold_4400_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3712..4584
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWX1_POLGS
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFL32037.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
branched-chain amino acid ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_4400_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4581..5498
DNA (918bp) protein (306aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCC0_PELHB
ABC transporter permease {ECO:0000313|EMBL:KFL32036.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
branched-chain amino acid transport system permease protein LivM
SCN18_25_8_15_R2_B_scaffold_4400_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5495..6220
DNA (726bp) protein (242aa)
High-affinity branched-chain amino acid transport ATP-binding protein BraF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWR2_9RHIZ
ABC transporter {ECO:0000313|EMBL:KFL32035.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
branched-chain amino acid transport ATP-binding protein LivG
SCN18_25_8_15_R2_B_scaffold_4400_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6213..6911
DNA (699bp) protein (233aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCC2_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL32034.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
branched-chain amino acid transport ATP-binding protein LivF
Displaying 7 items

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