ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4886_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(5571..5987)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 135.0
  • Bit_score: 164
  • Evalue 5.40e-38
Uncharacterized protein {ECO:0000313|EMBL:KFL30992.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 138.0
  • Bit_score: 255
  • Evalue 4.20e-65
TPR repeat protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 135.0
  • Bit_score: 164
  • Evalue 1.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGGCGGTGATCGACCGGGTTATCCGTCCCGATGCTCCGGACTGGTCGGCACTGCTGGTCAAGGGCGCATCGCTCGACCAGATGGCTCGGCATGGCGAAGCGCGTGCCCTTTACGCGCAGGCCGCAACCATTGCGCCGGGCGAAGCTTCGATCGAGACCAATCTCGGCCTGTCCTACGCAATGACCAATGAATTGCCGACAGCCGAGCAGCATCTCCGGCGTGCGGTGCAGATGCGTGGCGCCACGACGCAGACGCGGCAGAACCTTGCACTGATCGTGGGCTTGCAGGGTCGCTTTCAGGAGTGCCGCACGCTCTATGCCGCGGAACTGCCGCCCGACCAGGTCGAGGCCAATATGGCCTATGTCCGCGCTCTGCTGACCCAGCAGAACCGCTGGGACATGATCGACAAGGGCTGA
PROTEIN sequence
Length: 139
VAVIDRVIRPDAPDWSALLVKGASLDQMARHGEARALYAQAATIAPGEASIETNLGLSYAMTNELPTAEQHLRRAVQMRGATTQTRQNLALIVGLQGRFQECRTLYAAELPPDQVEANMAYVRALLTQQNRWDMIDKG*