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SCN18_25_8_15_R2_B_scaffold_4886

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4886_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..676
DNA (675bp) protein (225aa)
Putative Pilus assembly protein cpaC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08182.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative Pilus assembly protein cpaC
SCN18_25_8_15_R2_B_scaffold_4886_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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703..1980
DNA (1278bp) protein (426aa)
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS4_PELHB
CtpF protein {ECO:0000313|EMBL:KFL30996.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
SCN18_25_8_15_R2_B_scaffold_4886_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2019..3518
DNA (1500bp) protein (500aa)
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS5_PELHB
Protein kinase {ECO:0000313|EMBL:KFL30995.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
SCN18_25_8_15_R2_B_scaffold_4886_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3521..4498
DNA (978bp) protein (326aa)
Flp pilus assembly protein TadB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30994.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Flp pilus assembly protein TadB
SCN18_25_8_15_R2_B_scaffold_4886_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4517..5518
DNA (1002bp) protein (334aa)
Type II/IV secretion system protein TadC, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS7_PELHB
Type II secretion system protein {ECO:0000313|EMBL:KFL30993.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
type II/IV secretion system protein TadC, associated with Flp pilus assembly
SCN18_25_8_15_R2_B_scaffold_4886_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5571..5987)
DNA (417bp) protein (139aa)
TPR repeat protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL30992.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
TPR repeat protein
SCN18_25_8_15_R2_B_scaffold_4886_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6530..7183
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Burkholderiaceae RepID=R7XNX9_9RALS
Uncharacterized protein {ECO:0000313|EMBL:KFL31659.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4886_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7239..7766)
DNA (528bp) protein (176aa)
Hydrolase n=1 Tax=Ochrobactrum intermedium 229E RepID=U4V7M8_9RHIZ
Peptidase S15 {ECO:0000313|EMBL:KFL32856.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidase S15
Displaying 8 items

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