name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_25_8_15_R2_B_scaffold_393_trna_1
unknown
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Not on your lists |
1322..1395
|
transferRNA Met
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SCN18_25_8_15_R2_B_scaffold_393_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2172..3839
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ABC-type dipeptide transport system n=1 Tax=Oceanibaculum indicum P24 RepID=K2KCT7_9PROT
Peptide ABC transporter {ECO:0000313|EMBL:KJB95284.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
peptide ABC transporter
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SCN18_25_8_15_R2_B_scaffold_393_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3946..4899
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ABC-type dipeptide/oligopeptide/nickel transport system n=1 Tax=Oceanibaculum indicum P24 RepID=K2JXP9_9PROT
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AIB10771.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
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SCN18_25_8_15_R2_B_scaffold_393_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4896..5849
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ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0UZF0_RHILV
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJC66098.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
oppC2; putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane)
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SCN18_25_8_15_R2_B_scaffold_393_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5756..6379)
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SCN18_25_8_15_R2_B_scaffold_393_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6380..7306)
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UPI0003D1AD20 related cluster n=1 Tax=unknown RepID=UPI0003D1AD20
Contig35, whole genome shotgun sequence {ECO:0000313|EMBL:ETA52253.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
LysR family transcriptional regulator
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SCN18_25_8_15_R2_B_scaffold_393_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7424..8314
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Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K4U7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA07996.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
hydrolase
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SCN18_25_8_15_R2_B_scaffold_393_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8292..9203
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UPI0003D1B0C2 related cluster n=1 Tax=unknown RepID=UPI0003D1B0C2
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EBA07997.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
alpha/beta hydrolase fold protein
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SCN18_25_8_15_R2_B_scaffold_393_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9209..10771
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ABC transporter, substrate-binding protein, family 5 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLQ2_9PROT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFH11790.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
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SCN18_25_8_15_R2_B_scaffold_393_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10891..11862
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Putative transmembrane ABC transporter n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DL28_9RHIZ
Putative transmembrane ABC transporter {ECO:0000313|EMBL:EJT02459.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
transmembrane ABC transporter
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SCN18_25_8_15_R2_B_scaffold_393_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11876..12793
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Peptide ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBR8_9RHIZ
Oligopeptide ABC superfamily transporter membrane protein
Oligopeptide ABC superfamily transporter membrane protein {ECO:0000313|EMBL:AHF75788.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
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SCN18_25_8_15_R2_B_scaffold_393_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12790..13797
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Probable oligopeptide atp-binding abc transporter protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FTZ7_PELBH
Probable oligopeptide atp-binding abc transporter protein {ECO:0000313|EMBL:EAU47602.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
ATP-binding ABC transporter
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SCN18_25_8_15_R2_B_scaffold_393_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13794..14807
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Peptide ABC transporter ATP-binding protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QS66_9BURK
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETF02821.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
appF1; oligopeptide transport ATP-binding protein AppF
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SCN18_25_8_15_R2_B_scaffold_393_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15559..16308)
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ABC transporter n=1 Tax=Pseudomonas fluorescens RepID=UPI0002EF8B09
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXF92968.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
amino acid ABC transporter ATP-binding protein
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SCN18_25_8_15_R2_B_scaffold_393_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16317..17018)
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Putative ABC-type amino acid transporter, permease component n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9N8_BORPD
ABC transporter, permease protein {ECO:0000313|EMBL:KCB41800.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
amino acid ABC transporter permease
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SCN18_25_8_15_R2_B_scaffold_393_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17024..17719)
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Amino acids ABC transporter, permease protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9P1_BORPD
amino acids ABC transporter permease
Amino acids ABC transporter, permease protein {ECO:0000313|EMBL:CAP44488.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
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SCN18_25_8_15_R2_B_scaffold_393_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17724..18554)
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Probable solute-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9P2_BORPD
solute-binding protein
Probable solute-binding protein {ECO:0000313|EMBL:CAP44489.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
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SCN18_25_8_15_R2_B_scaffold_393_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18853..20388
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Substrate-CoA ligase n=2 Tax=Alcaligenes RepID=M5IY43_9BURK
Substrate-CoA ligase {ECO:0000313|EMBL:KGP02700.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
substrate-CoA ligase
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SCN18_25_8_15_R2_B_scaffold_393_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20419..21153
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GntR-family transcriptional regulator n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KVG5_BORA1
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EJC65144.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
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SCN18_25_8_15_R2_B_scaffold_393_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21167..21946
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Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KVG7_BORA1
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:CAJ48584.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
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SCN18_25_8_15_R2_B_scaffold_393_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(22423..23679)
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D-amino acid dehydrogenase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035E1B83
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:CEJ14823.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
D-amino acid dehydrogenase small subunit
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SCN18_25_8_15_R2_B_scaffold_393_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23787..24353
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SCN18_25_8_15_R2_B_scaffold_393_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24365..25420)
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hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036AA097
Uncharacterized protein {ECO:0000313|EMBL:KHJ53199.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
chemotaxis protein CheY
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SCN18_25_8_15_R2_B_scaffold_393_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25443..25886)
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Two-component response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFP5_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB10006.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
two-component response regulator
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SCN18_25_8_15_R2_B_scaffold_393_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25883..27457)
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
Cyanobacterial phytochrome B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ00_9RHIZ
two component sensor kinase
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SCN18_25_8_15_R2_B_scaffold_393_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27615..28139)
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Twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRU8_RHOP2
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD09062.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
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SCN18_25_8_15_R2_B_scaffold_393_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28206..28613
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRU6_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD09064.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
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SCN18_25_8_15_R2_B_scaffold_393_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28610..28990
|
Regulatory protein ArsR n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFI2_XANP2
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KFC66553.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
regulatory protein ArsR
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SCN18_25_8_15_R2_B_scaffold_393_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29022..30095
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Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTV7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC66552.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
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SCN18_25_8_15_R2_B_scaffold_393_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
30245..31039
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hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037B4C40
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61804.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
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