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SCN18_25_8_15_R2_B_scaffold_525_14

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(17933..18847)

Top 3 Functional Annotations

Value Algorithm Source
Quorum-sensing regulator protein D n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YTE1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 292.0
  • Bit_score: 180
  • Evalue 1.60e-42
Quorum-sensing regulator protein D {ECO:0000313|EMBL:ESS14937.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 292.0
  • Bit_score: 180
  • Evalue 2.20e-42
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 304.0
  • Bit_score: 172
  • Evalue 1.20e-40

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAGTTGGGGTGGCTGGAGGATTTTCTGGCGTTGCGCGAGCTCGGCAGCTTCACGGCCGCCGCCGAGCGCCGCAACATCAGCCAGTCGGCATTCTCGCGACGCATCCAGTCCCTCGAGGAATGGCTCGGCGTCACTCTGATCGACAGGAGCGTACGGCCGCATCGCTTTACGCCGGTCGCAGCGGAGAATTACGGCGATTTCCAGCGCAGCCTCAATCAGCTCTATGAACTGCGCAGCCAGCTACGCGGCGAGCAGACCCGAAGCTCGCGCCTCAAGGTCGCAATCCAACACTCGCTGGCTTTCTCGATCTTCCCGCGCCTCGTCGGGATCCTGCGACAGCAGGGCTACCAGCCAGCCTATCACCTAAGCTGCGCGAACCGGGCCGAGTGTGTGGAAATGGCAATCCGCGGCGAGGTGGATCTGATGATTTGCTACGAGCTGAGCCCGTCGCTTGAGCCGATCGCCTCGACGGCCGCCGTACGCGTCGCAAGCGCTCGGGACGACATGATCCTGGTCGGCCCGGCCGCCCTCGCCCCCGATGAGGAGCAGGCCATGCCGCTCCTGACCTATCCCCAGCGCAGCTTTTTCGGCGAGGTGATCTGGCAGAAGGTCATGCCGCAGCTGATCAAGCGCTACCGCTGCGAAACGATCTGCGTGAACTCGCTCAGCAGCGCATTGCGCGAGATGCTGCTCGCAGGGCTGGGCTTCGCCTGGTTGCCACGCAGTCTCGTACTCGACGACCTGGAGCGGGGGCAGATCATGCAACTCGACGAAGAGACGCTCTTTCATTCCATGGGCGTCGCAATCTACGCGTGCCCGCACGATTCAGGAGCATTGTCACCAACGGTACTGGATCGCCTGCGTGCCGTCGATTTGCAGGCACTGATCGACCGGAGAATTGAGAGCCCTTAA
PROTEIN sequence
Length: 305
MELGWLEDFLALRELGSFTAAAERRNISQSAFSRRIQSLEEWLGVTLIDRSVRPHRFTPVAAENYGDFQRSLNQLYELRSQLRGEQTRSSRLKVAIQHSLAFSIFPRLVGILRQQGYQPAYHLSCANRAECVEMAIRGEVDLMICYELSPSLEPIASTAAVRVASARDDMILVGPAALAPDEEQAMPLLTYPQRSFFGEVIWQKVMPQLIKRYRCETICVNSLSSALREMLLAGLGFAWLPRSLVLDDLERGQIMQLDEETLFHSMGVAIYACPHDSGALSPTVLDRLRAVDLQALIDRRIESP*