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SCN18_25_8_15_R2_B_scaffold_525_22

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(24629..25144)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LX90_METRJ similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 3.80e-33
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 1.10e-33
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB27211.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 148
  • Evalue 5.30e-33

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGCTCGGCAGCGTGTCCGACCTCGAGATCGAGGCCCAGATCCCGGCGCTACGGCGGTTCGCACGCTCGCTGGCGCGCAATCCCGACGATGCCGACGAACTGGTTCAGGACACGCTGCTGCAGGCGCTCTCGCGCTGGCGGCAGCTAAGAAGGCCGGAGAGCATCCGAGCCTGGCTGTTCCAGATCCTGTTCAATCTCCATCGCACCAGGGGTCGCGGCCGTCAGCGCGACCTCGCCCGCTTCAGCGACGCTGACGGTGCCGACCATCCCGACCCCTCCTGCGACCCCGCGCAGGCGCTGCATCTCGGCGATACGCTCGCAGCACTGGCGCGGCTGCCGCAGGATCAGCGCATCGCGCTCGAACTCGTCGCGGTAGAGGACATGACCTATGAAGAAGTCGCCAGGGTGACCGATGTCCCGATCGGAACGGTGATGTCGCGCCTGAGCCGCGCCCGCGAGCGGCTGCGCTCCGAGCTCGAAGGCGGCAATGTGACTCAATTGCGGAGGCTGAAATGA
PROTEIN sequence
Length: 172
VLGSVSDLEIEAQIPALRRFARSLARNPDDADELVQDTLLQALSRWRQLRRPESIRAWLFQILFNLHRTRGRGRQRDLARFSDADGADHPDPSCDPAQALHLGDTLAALARLPQDQRIALELVAVEDMTYEEVARVTDVPIGTVMSRLSRARERLRSELEGGNVTQLRRLK*