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SCN18_25_8_15_R2_B_scaffold_525_29

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 30459..30791

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type mannitol/chloroaromatic compound transport system, large permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CTC5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 101.0
  • Bit_score: 85
  • Evalue 1.90e-14
TRAP-type mannitol/chloroaromatic compound transport system, large permease component {ECO:0000313|EMBL:EJL78084.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 101.0
  • Bit_score: 85
  • Evalue 2.70e-14
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 100.0
  • Bit_score: 79
  • Evalue 3.90e-13

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGCGGGTCGAGGATGCGCAATGGGTTGCGGTCCTGACCCTGCTCGTGCTGCAGACGAGTTTCCTGCTTCCACCGCTGGGTTATGCGCTGACCATGACCCGGGCCGCCGCCACGCGTCGCGCGGCGCTGGGCAGCGTGATGAGCGCGCTCCTGCCCTTCATCCTCGTGCAACTCACGGTGACCGCGGCCGTCATGTGGTGGCCGGGCCTGACGCATGGAGGACGGTCGACTGCCACGGACGTCGCAGTGCCGTCCGACACGGAAGTCACGCGCCGGTTGCGGGAGATCGCCCCACCCGTCGACCTGCTGGAGATCGGGCCTCCCAAATTCTGA
PROTEIN sequence
Length: 111
MRVEDAQWVAVLTLLVLQTSFLLPPLGYALTMTRAAATRRAALGSVMSALLPFILVQLTVTAAVMWWPGLTHGGRSTATDVAVPSDTEVTRRLREIAPPVDLLEIGPPKF*