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SCN18_25_8_15_R2_B_scaffold_5489

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_5489_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..343
DNA (342bp) protein (114aa)
Elongation factor P n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA0_NIAKG
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_5489_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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422..901
DNA (480bp) protein (160aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB5_CHIPD
Biotin carboxyl carrier protein {ECO:0000313|EMBL:GAO42932.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
SCN18_25_8_15_R2_B_scaffold_5489_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1005..2342
DNA (1338bp) protein (446aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:AEV96708.1}; EC=6.4.1.1 {ECO:0000313|EMBL:AEV96708.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA2_NIAKG
acetyl-CoA carboxylase, biotin carboxylase
SCN18_25_8_15_R2_B_scaffold_5489_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2522..4306)
DNA (1785bp) protein (595aa)
Beta-glucan-transporting ATPase {ECO:0000313|EMBL:AEW01809.1}; EC=3.6.3.42 {ECO:0000313|EMBL:AEW01809.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Beta-glucan-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJR1_NIAKG
Beta-glucan-transporting ATPase
SCN18_25_8_15_R2_B_scaffold_5489_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4438..5502)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLA0_NIAKG
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAO41740.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_5489_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5739..6077)
DNA (339bp) protein (113aa)
Ribosome-binding factor A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLA1_NIAKG
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_5489_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6231..8003
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365BE23
xenobiotic-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_25_8_15_R2_B_scaffold_5489_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8493..9350
DNA (858bp) protein (286aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR6_NIAKG
PASTA domain protein {ECO:0000313|EMBL:AIA16524.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nicotinate-nucleotide pyrophosphorylase
SCN18_25_8_15_R2_B_scaffold_5489_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9455..9796
DNA (342bp) protein (114aa)
Translation initiation factor SUI1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMR7_NIAKG
Translation initiation factor SUI1 {ECO:0000313|EMBL:AIA16525.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation initiation factor SUI1
Displaying 9 items

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