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SCN18_25_8_15_R2_B_scaffold_1983

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1983_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..237
DNA (237bp) protein (79aa)
P-type ATPase, translocating n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JS00_9FLAO
pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase
P-type ATPase, translocating {ECO:0000313|EMBL:EJL70575.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SCN18_25_8_15_R2_B_scaffold_1983_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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364..810
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH90_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01700.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_1983_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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930..2858
DNA (1929bp) protein (643aa)
Aminopeptidase N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH89_NIAKG
Peptidase M1 {ECO:0000313|EMBL:KIC95562.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aminopeptidase N
SCN18_25_8_15_R2_B_scaffold_1983_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2922..4064)
DNA (1143bp) protein (381aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Cysteine desulfurase IscS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX0_NIAKG
cysteine desulfurase IscS
SCN18_25_8_15_R2_B_scaffold_1983_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4189..7470
DNA (3282bp) protein (1094aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F6084
Putative cytochrome c {ECO:0000313|EMBL:EPR69614.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
membrane-bound dehydrogenase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1983_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7589..8206)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F5FA9
Uncharacterized protein {ECO:0000313|EMBL:ETZ21615.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1983_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8300..9694)
DNA (1395bp) protein (465aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI0003753047
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT92646.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCN18_25_8_15_R2_B_scaffold_1983_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9917..11050)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VLS5_9BACT
Marine sediment metagenome DNA, contig: S12H4_L02050 {ECO:0000313|EMBL:GAI79458.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_25_8_15_R2_B_scaffold_1983_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11115..12440)
DNA (1326bp) protein (442aa)
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VND3_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR70887.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
RagB/SusD domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1983_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12450..12764)
DNA (315bp) protein (105aa)
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VND3_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR70887.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
SCN18_25_8_15_R2_B_scaffold_1983_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12783..15893)
DNA (3111bp) protein (1037aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7X454_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR70888.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_1983_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15938..16078)
DNA (141bp) protein (47aa)
Displaying 12 items

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