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SCN18_25_8_15_R2_B_scaffold_2274

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2274_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..623)
DNA (621bp) protein (207aa)
bacC3; short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBT1_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH51355.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCN18_25_8_15_R2_B_scaffold_2274_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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803..2518
DNA (1716bp) protein (572aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM94_CHIPD
Putative L,D-transpeptidase {ECO:0000313|EMBL:GAO43278.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ErfK/YbiS/YcfS/YnhG family protein
SCN18_25_8_15_R2_B_scaffold_2274_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2628..3023
DNA (396bp) protein (132aa)
Rare lipoprotein A n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A2B4_METMM
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:AEF98926.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SCN18_25_8_15_R2_B_scaffold_2274_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3119..4462
DNA (1344bp) protein (448aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ1_NIAKG
OmpA family protein {ECO:0000313|EMBL:GAO43280.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
OmpA/MotB domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2274_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5093..5563
DNA (471bp) protein (157aa)
SCN18_25_8_15_R2_B_scaffold_2274_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5673..6554
DNA (882bp) protein (294aa)
SCN18_25_8_15_R2_B_scaffold_2274_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6874..9642
DNA (2769bp) protein (923aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQW8_HALH1
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEE52253.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCN18_25_8_15_R2_B_scaffold_2274_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9815..10516
DNA (702bp) protein (234aa)
SCN18_25_8_15_R2_B_scaffold_2274_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10591..11019
DNA (429bp) protein (143aa)
SCN18_25_8_15_R2_B_scaffold_2274_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11320..12171
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5L9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29795.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2274_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12228..12611
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBD5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC19940.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2274_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12650..13087
DNA (438bp) protein (146aa)
SCN18_25_8_15_R2_B_scaffold_2274_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13249..13590
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Enterovibrio norvegicus RepID=UPI0002F77A40
Membrane protein {ECO:0000313|EMBL:KJH79863.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2274_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13633..13935
DNA (303bp) protein (101aa)
Displaying 14 items

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