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SCN18_25_8_15_R2_B_scaffold_2309

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2309_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..482
DNA (480bp) protein (160aa)
Acetolactate synthase, small subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK72_NIAKG
Acetohydroxyacid synthase small subunit {ECO:0000313|EMBL:KIC90324.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acetolactate synthase small subunit
SCN18_25_8_15_R2_B_scaffold_2309_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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604..1107
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CD84_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ78840.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCN18_25_8_15_R2_B_scaffold_2309_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1112..2161
DNA (1050bp) protein (350aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ketol-acid reductoisomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK73_NIAKG
ketol-acid reductoisomerase
SCN18_25_8_15_R2_B_scaffold_2309_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2291..3577
DNA (1287bp) protein (429aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L-threonine ammonia-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK74_NIAKG
L-threonine ammonia-lyase
SCN18_25_8_15_R2_B_scaffold_2309_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3724..8235
DNA (4512bp) protein (1504aa)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:AEV96509.1}; EC=1.4.1.14 {ECO:0000313|EMBL:AEV96509.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glutamate synthase (NADH) large subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK75_NIAKG
glutamate synthase (NADH) large subunit
SCN18_25_8_15_R2_B_scaffold_2309_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8274..9788
DNA (1515bp) protein (505aa)
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:AEV96510.1}; EC=1.4.1.14 {ECO:0000313|EMBL:AEV96510.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glutamate synthase (NADH) small subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK76_NIAKG
glutamate synthase (NADH) small subunit
SCN18_25_8_15_R2_B_scaffold_2309_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9846..11636
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361150E
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AFK02303.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCN18_25_8_15_R2_B_scaffold_2309_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11707..12456)
DNA (750bp) protein (250aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEI49009.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEI49009.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
glucosamine-6-phosphate deaminase n=1 Tax=Segetibacter koreensis RepID=UPI00035CC344
glucosamine-6-phosphate deaminase
SCN18_25_8_15_R2_B_scaffold_2309_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12490..13605)
DNA (1116bp) protein (372aa)
N-acetylglucosamine related transporter, NagX n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZSX2_9BACT
N-acetylglucosamine related transporter, NagX {ECO:0000313|EMBL:EON77128.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
Displaying 9 items

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