ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2845

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2845_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH23_NIAKG
Usp family protein {ECO:0000313|EMBL:GAO43703.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
UspA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2845_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

365..1660
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRS8_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07716.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCN18_25_8_15_R2_B_scaffold_2845_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2057..2440
DNA (384bp) protein (128aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWM4_9CHLR
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EFH84607.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
activator of Hsp90 ATPase 1 family protein
SCN18_25_8_15_R2_B_scaffold_2845_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2596..3129
DNA (534bp) protein (178aa)
KilA-N, DNA-binding domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRK9_NIAKG
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:AEW01140.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2845_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3212..4435)
DNA (1224bp) protein (408aa)
DNA polymerase III gamma/tau subunits-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU7_NIAKG
DNA polymerase III gamma/tau subunits-like protein
DNA polymerase III gamma/tau subunits-like protein {ECO:0000313|EMBL:AEW02032.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2845_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4479..5726)
DNA (1248bp) protein (416aa)
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEW03471.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEW03471.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Transcriptional regulator, MarR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBH1_NIAKG
MarR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2845_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5844..6938)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03230.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_25_8_15_R2_B_scaffold_2845_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7032..7682
DNA (651bp) protein (217aa)
Uracil phosphoribosyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSG8_9SPHI
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:KIC90620.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
uracil phosphoribosyltransferase
SCN18_25_8_15_R2_B_scaffold_2845_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7721..8737
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C371F
Uncharacterized protein {ECO:0000313|EMBL:GAO41619.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2845_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9030..10382)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BWB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82173.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
RagB/SusD family protein
SCN18_25_8_15_R2_B_scaffold_2845_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10399..11049)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82174.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
TonB-dependent receptor
Displaying 11 items

View Taxonomy