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SCN18_25_8_15_R2_B_scaffold_839

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_839_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..2310)
DNA (2310bp) protein (770aa)
Peptidase, S8/S53 family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QCL4_BREDI
Peptidase, S8/S53 family {ECO:0000313|EMBL:EKY25714.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
peptidase S8/S53 subtilisin kexin sedolisin
SCN18_25_8_15_R2_B_scaffold_839_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2395..3264)
DNA (870bp) protein (290aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVH9_BREDI
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
SCN18_25_8_15_R2_B_scaffold_839_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3261..3974)
DNA (714bp) protein (238aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVH8_BREDI
HAD-superfamily hydrolase, subfamily IA, variant 3 family protein {ECO:0000313|EMBL:EGF96607.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pyrimidine 5'-nucleotidase
SCN18_25_8_15_R2_B_scaffold_839_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3971..4900)
DNA (930bp) protein (310aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Acetylglutamate kinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDQ0_BREDI
acetylglutamate kinase
SCN18_25_8_15_R2_B_scaffold_839_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4960..5784)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GVW2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL34565.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_839_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6007..8088
DNA (2082bp) protein (694aa)
N-acylglucosamine 2-epimerase family {ECO:0000313|EMBL:EDX81527.1}; EC=5.1.3.8 {ECO:0000313|EMBL:EDX81527.1};; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
mannose-1-phosphate guanylyltransferase (EC:5.3.1.8 2.7.7.13)
N-acylglucosamine 2-epimerase family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEX6_9CAUL
SCN18_25_8_15_R2_B_scaffold_839_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8115..9089
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000308C05B
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ABZ69274.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_25_8_15_R2_B_scaffold_839_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9107..10051)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036A30E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70355.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_25_8_15_R2_B_scaffold_839_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10199..10864)
DNA (666bp) protein (222aa)
SCN18_25_8_15_R2_B_scaffold_839_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10864..11985)
DNA (1122bp) protein (374aa)
putative glycosyltransferase n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237EC7E
Glycosyl transferase {ECO:0000313|EMBL:GAO00820.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
putative glycosyltransferase
SCN18_25_8_15_R2_B_scaffold_839_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11975..13783)
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237EC7F
Uncharacterized protein {ECO:0000313|EMBL:GAO00821.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_839_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14002..16539
DNA (2538bp) protein (846aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WF76_9CAUL
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDX81287.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
glycosyl transferase family 2 (modular protein)
SCN18_25_8_15_R2_B_scaffold_839_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16539..17426
DNA (888bp) protein (296aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Xanthobacteraceae RepID=UPI000360EC4A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
SCN18_25_8_15_R2_B_scaffold_839_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17423..18304
DNA (882bp) protein (294aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QP30_BRESC
SCN18_25_8_15_R2_B_scaffold_839_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18335..19144)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus (strain MIT 9303) RepID=A2C5X8_PROM3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII46655.1}; TaxID=585423 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. KORDI-49.;"
SCN18_25_8_15_R2_B_scaffold_839_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19294..20052
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TPU7_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV15332.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_25_8_15_R2_B_scaffold_839_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20239..21831
DNA (1593bp) protein (531aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus pneumoniae (strain Hungary19A-6) RepID=B1I7N4_STRPI
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:ACA36642.1}; TaxID=487214 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae (strain Hungary19A-6).;"
SCN18_25_8_15_R2_B_scaffold_839_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21917..23758
DNA (1842bp) protein (614aa)
Probable type II secretion protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UGZ5_9RHOB
General secretion pathway protein E {ECO:0000313|EMBL:GAM98296.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative type II secretion protein
SCN18_25_8_15_R2_B_scaffold_839_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23769..24977
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B3E577
General secretion pathway protein F {ECO:0000313|EMBL:GAM98295.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
type II secretion system protein
SCN18_25_8_15_R2_B_scaffold_839_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24977..25408
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B38E63
Uncharacterized protein {ECO:0000313|EMBL:GAM98293.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
SCN18_25_8_15_R2_B_scaffold_839_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25413..27749)
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000374E6DF
General secretion pathway protein D {ECO:0000313|EMBL:GAM98303.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
gspD; general secretion pathway protein D
SCN18_25_8_15_R2_B_scaffold_839_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27767..28234)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ficedula albicollis RepID=U3JPB0_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000004614}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
flagellar FliL protein
SCN18_25_8_15_R2_B_scaffold_839_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28231..28875)
DNA (645bp) protein (215aa)
SCN18_25_8_15_R2_B_scaffold_839_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29118..29534
DNA (417bp) protein (139aa)
type II secretion system protein G n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B3525F
General secretion pathway protein G {ECO:0000313|EMBL:GAM98297.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
tyep II secretion system protein G
SCN18_25_8_15_R2_B_scaffold_839_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29509..29973
DNA (465bp) protein (155aa)
SCN18_25_8_15_R2_B_scaffold_839_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29991..31073)
DNA (1083bp) protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM98300.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
SCN18_25_8_15_R2_B_scaffold_839_27
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31042..32103)
DNA (1062bp) protein (354aa)
general secretion pathway protein K n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000372DA77
hypothetical protein
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
SCN18_25_8_15_R2_B_scaffold_839_28
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32090..32707)
DNA (618bp) protein (206aa)
SCN18_25_8_15_R2_B_scaffold_839_29
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32825..33820
DNA (996bp) protein (332aa)
SleB-like protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z381_SPHJU
Cell wall hydrolase SleB {ECO:0000313|EMBL:KEQ54184.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SleB-like protein
SCN18_25_8_15_R2_B_scaffold_839_30
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33838..34404
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADH87420.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADH87420.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A006_STAND
Displaying items 1-30 of 36 in total

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