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SCN18_25_8_15_R2_B_scaffold_969

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_969_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2154
DNA (2154bp) protein (718aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Putative non-motile and phage-resistance protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSN6_BREDI
PAS/PAC sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_969_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2168..2692)
DNA (525bp) protein (175aa)
Integral membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUN7_BREDI
Integral membrane protein {ECO:0000313|EMBL:EGF96316.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2689..3120)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRQ9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30713.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3117..3752)
DNA (636bp) protein (212aa)
RNA polymerase sigma factor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QT35_BREDI
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCN18_25_8_15_R2_B_scaffold_969_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4450)
DNA (636bp) protein (212aa)
EF hand n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS10_BREDI
EF hand {ECO:0000313|EMBL:EKY30711.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Calcium-binding EF-hand-containing protein
SCN18_25_8_15_R2_B_scaffold_969_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4518..7403)
DNA (2886bp) protein (962aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
[glutamate--ammonia-ligase] adenylyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSN1_BREDI
SCN18_25_8_15_R2_B_scaffold_969_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7400..8860)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUN9_BREDI
integral membrane sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_969_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8838..9203)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T195_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:KIC60397.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9305..9976)
DNA (672bp) protein (224aa)
Transcriptional activator protein copR n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUP0_BREDI
Transcriptional activator protein copR {ECO:0000313|EMBL:EGF96319.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_969_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10042..11589)
DNA (1548bp) protein (516aa)
Peptidase Do n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QT31_BREDI
Peptidase Do {ECO:0000313|EMBL:EKY30707.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
protease Do
SCN18_25_8_15_R2_B_scaffold_969_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11774..12253)
DNA (480bp) protein (160aa)
Cytochrome C-type biogenesis protein CcmH family protein (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSM6_BREDI
Cytochrome C-type biogenesis protein CcmH family protein {ECO:0000313|EMBL:EKY30705.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cytochrome C biogenesis protein
SCN18_25_8_15_R2_B_scaffold_969_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12250..14250)
DNA (2001bp) protein (667aa)
Putative cytochrome c-type biogenesis protein CcmF n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMQ1_BREDI
Putative cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:EKY28822.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cytochrome C assembly protein
SCN18_25_8_15_R2_B_scaffold_969_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14255..14746)
DNA (492bp) protein (164aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLI8_BREDI
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
CcmE/CycJ protein
SCN18_25_8_15_R2_B_scaffold_969_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14814..15632)
DNA (819bp) protein (273aa)
Tetratricopeptide repeat protein (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLH0_BREDI
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKY28824.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cytochrome C biogenesis protein CcmI
SCN18_25_8_15_R2_B_scaffold_969_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15651..17015)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRQ2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30232.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..17881)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZBD2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58780.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17975..19417)
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRB5_BREDI
integral membrane sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_969_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19425..20105)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQE5_BREDI
Response regulator receiver domain protein {ECO:0000313|EMBL:EKY30229.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_969_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20106..20447)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQD8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30228.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_969_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20693..21073
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUQ0_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96329.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21217..22005
DNA (789bp) protein (263aa)
Aminomethyltransferase folate-binding domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUQ1_BREDI
Aminomethyltransferase folate-binding domain protein {ECO:0000313|EMBL:EGF96330.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
folate-binding protein YgfZ
SCN18_25_8_15_R2_B_scaffold_969_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22116..22580
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QK08_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28045.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22577..22777
DNA (201bp) protein (67aa)
DNA-binding helix-turn-helix protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QJD4_BREDI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY28046.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
XRE family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_969_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22831..22986
DNA (156bp) protein (52aa)
SCN18_25_8_15_R2_B_scaffold_969_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23131..24102
DNA (972bp) protein (324aa)
GumN protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKE0_BREDI
GumN protein {ECO:0000313|EMBL:EKY28047.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
GumN family protein
SCN18_25_8_15_R2_B_scaffold_969_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24189..24794
DNA (606bp) protein (202aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:EGF96331.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EGF96331.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase 1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUQ2_BREDI
SCN18_25_8_15_R2_B_scaffold_969_27
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24885..25841)
DNA (957bp) protein (319aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVE5_BREDI
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EGF96574.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
beta-lactamase
SCN18_25_8_15_R2_B_scaffold_969_28
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25923..26525
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVE6_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96575.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_969_29
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26525..26791
DNA (267bp) protein (89aa)
XRE family transcriptional regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVE7_BREDI
XRE family transcriptional regulator {ECO:0000313|EMBL:EGF96576.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
XRE family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_969_30
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26899..27549
DNA (651bp) protein (217aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6J2_BREDI
Displaying items 1-30 of 36 in total

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