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SCN18_25_8_15_R2_B_scaffold_972

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_972_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18..1310)
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Serine--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZK9_BREDI
serS; seryl-tRNA synthetase
SCN18_25_8_15_R2_B_scaffold_972_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1570..2871)
DNA (1302bp) protein (434aa)
Prokaryotic cytochrome b561 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL0_BREDI
Prokaryotic cytochrome b561 family protein {ECO:0000313|EMBL:EGF94834.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_972_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2947..3651)
DNA (705bp) protein (235aa)
YceI-like domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QME4_BREDI
YceI-like domain protein {ECO:0000313|EMBL:EKY29164.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_972_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3863..5785
DNA (1923bp) protein (641aa)
DNA mismatch repair protein MutL n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNL6_BREDI
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DNA mismatch repair protein MutL
SCN18_25_8_15_R2_B_scaffold_972_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..7315
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8I4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY24236.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
major facilitator superfamily protein
SCN18_25_8_15_R2_B_scaffold_972_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7316..8104
DNA (789bp) protein (263aa)
Protein MazG n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q931_BREDI
Protein MazG {ECO:0000313|EMBL:EKY24235.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
MazG family protein
SCN18_25_8_15_R2_B_scaffold_972_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8101..8775
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035E07C1
HAD-superfamily hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R2_B_scaffold_972_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8772..10400)
DNA (1629bp) protein (543aa)
Na+/H+ antiporter n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8D8_BREDI
Na+/H+ antiporter {ECO:0000313|EMBL:EKY24234.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Na+/H+ antiporter
SCN18_25_8_15_R2_B_scaffold_972_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10408..11721)
DNA (1314bp) protein (438aa)
GTPase HflX n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8D9_BREDI
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
GTP-binding proten HflX
SCN18_25_8_15_R2_B_scaffold_972_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..11967)
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=2 Tax=Brevundimonas diminuta RepID=L1Q9D6_BREDI
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
RNA chaperone Hfq
SCN18_25_8_15_R2_B_scaffold_972_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12114..12917)
DNA (804bp) protein (268aa)
type 11 methyltransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028926CC
type 11 methyltransferase
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
SCN18_25_8_15_R2_B_scaffold_972_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12927..13787)
DNA (861bp) protein (287aa)
D-alanine aminotransferase {ECO:0000313|EMBL:EGF94454.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EGF94454.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
D-alanine aminotransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K9_BREDI
class IV aminotransferase
SCN18_25_8_15_R2_B_scaffold_972_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13787..15193)
DNA (1407bp) protein (469aa)
Nitrogen assimilation regulatory protein ntrX n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K8_BREDI
Nitrogen assimilation regulatory protein ntrX {ECO:0000313|EMBL:EGF94453.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Fis family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_972_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15204..17456)
DNA (2253bp) protein (751aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Nitrogen regulation protein ntrY n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K7_BREDI
multi-sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_972_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17456..18505)
DNA (1050bp) protein (350aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
tRNA-dihydrouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K6_BREDI
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_972_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18570..19712
DNA (1143bp) protein (381aa)
Bifunctional enzyme IspD/IspF n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K5_BREDI
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SCN18_25_8_15_R2_B_scaffold_972_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19775..20572
DNA (798bp) protein (266aa)
Acyltransferase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K0_BREDI
Acyltransferase family protein {ECO:0000313|EMBL:EGF94445.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phospholipid/glycerol acyltransferase
SCN18_25_8_15_R2_B_scaffold_972_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20569..21378)
DNA (810bp) protein (270aa)
Lipoprotein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNE4_BREDI
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
NLPA lipoprotein
SCN18_25_8_15_R2_B_scaffold_972_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21398..22054)
DNA (657bp) protein (219aa)
Binding-protein-dependent transport system inner membrane component family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2J8_BREDI
Binding-protein-dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EGF94443.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
binding-protein-dependent transporters inner membrane component
SCN18_25_8_15_R2_B_scaffold_972_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22054..23043)
DNA (990bp) protein (330aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QML8_BREDI
ABC transporter
SCN18_25_8_15_R2_B_scaffold_972_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23045..23443)
DNA (399bp) protein (133aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNT2_BREDI
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EKY29227.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
iron-sulfur cluster assembly accessory protein
SCN18_25_8_15_R2_B_scaffold_972_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23455..23853)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2J5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94440.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
FeS assembly SUF system protein
SCN18_25_8_15_R2_B_scaffold_972_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23859..25112)
DNA (1254bp) protein (418aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Cysteine desulfurase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QND7_BREDI
SufS subfamily cysteine desulfurase
SCN18_25_8_15_R2_B_scaffold_972_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25091..26113)
DNA (1023bp) protein (341aa)
SufB/sufD domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMK6_BREDI
SufB/sufD domain protein {ECO:0000313|EMBL:EKY29224.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SufBD protein
SCN18_25_8_15_R2_B_scaffold_972_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26110..26859)
DNA (750bp) protein (250aa)
FeS assembly ATPase SufC n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2J3_BREDI
FeS assembly ATPase SufC {ECO:0000313|EMBL:EGF94438.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
FeS assembly ATPase SufC
SCN18_25_8_15_R2_B_scaffold_972_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26880..28346)
DNA (1467bp) protein (489aa)
FeS assembly protein SufB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNS6_BREDI
FeS assembly protein SufB {ECO:0000313|EMBL:EKY29222.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
FeS assembly protein SufB
SCN18_25_8_15_R2_B_scaffold_972_27
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28350..29486)
DNA (1137bp) protein (379aa)
Cysteine desulfurase (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMQ4_BREDI
Aminotransferase, class V {ECO:0000313|EMBL:EKY29221.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_972_28
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29483..29950)
DNA (468bp) protein (156aa)
HTH-type transcriptional regulator IscR n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QND2_BREDI
HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EKY29220.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
BadM/Rrf2 family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_972_29
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30109..30759
DNA (651bp) protein (217aa)
Alpha/beta fold family hydrolase-like protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2J0_BREDI
Alpha/beta fold family hydrolase-like protein {ECO:0000313|EMBL:EGF94435.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_972_30
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30922..31878)
DNA (957bp) protein (319aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNS0_BREDI
Putative membrane protein {ECO:0000313|EMBL:EKY29217.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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