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SCN18_25_8_15_R2_B_scaffold_996

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_996_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:EGF96004.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EGF96004.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
NADP-dependent malic enzyme n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR7_BREDI
phosphate acetyl/butaryl transferase
SCN18_25_8_15_R2_B_scaffold_996_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267..1181)
DNA (915bp) protein (305aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Diaminopimelate epimerase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR6_BREDI
diaminopimelate epimerase
SCN18_25_8_15_R2_B_scaffold_996_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1231..2034
DNA (804bp) protein (268aa)
Ion transport family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR5_BREDI
Ion transport family protein {ECO:0000313|EMBL:EGF96002.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ion transport 2 domain-containing protein
SCN18_25_8_15_R2_B_scaffold_996_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2143..4314
DNA (2172bp) protein (724aa)
Prolyl endopeptidase {ECO:0000313|EMBL:EGF96001.1}; EC=3.4.21.26 {ECO:0000313|EMBL:EGF96001.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl endopeptidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR4_BREDI
SCN18_25_8_15_R2_B_scaffold_996_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4456..6657
DNA (2202bp) protein (734aa)
prolyl oligopeptidase (EC:3.4.21.26)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGW2_BREDI
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EKY27191.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_996_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6833..7591
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHX9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27192.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_996_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7667..9634
DNA (1968bp) protein (656aa)
Probable potassium transport system protein kup n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGT9_BREDI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
potassium transporter
SCN18_25_8_15_R2_B_scaffold_996_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9631..11025
DNA (1395bp) protein (465aa)
Putative ribosomal RNA small subunit methyltransferase B n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGQ1_BREDI
Putative ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:EKY27194.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Fmu (Sun) domain-containing protein
SCN18_25_8_15_R2_B_scaffold_996_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11022..11828)
DNA (807bp) protein (269aa)
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHP4_BREDI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY27195.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
SCN18_25_8_15_R2_B_scaffold_996_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11821..12291)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95997.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_996_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..14741
DNA (2352bp) protein (784aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Sensor protein DivL n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHY4_BREDI
PAS/PAC sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_996_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14795..15649
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZQ8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95995.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_996_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15879..16907)
DNA (1029bp) protein (343aa)
Methionine synthase, vitamin-B12 independent n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q973_BREDI
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EKY24519.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
SCN18_25_8_15_R2_B_scaffold_996_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16936..17922)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q986_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY24518.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_996_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18308..19705)
DNA (1398bp) protein (466aa)
DNA-binding helix-turn-helix protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QA60_BREDI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY24517.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
XRE family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_996_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19837..21051)
DNA (1215bp) protein (405aa)
methylitaconate delta2-delta3-isomerase (EC:5.3.3.6)
Putative AcnD-accessory protein PrpF n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9C1_BREDI
Putative AcnD-accessory protein PrpF {ECO:0000313|EMBL:EKY24516.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_996_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21052..23676)
DNA (2625bp) protein (875aa)
2-methylisocitrate dehydratase, Fe/S-dependent n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9X1_BREDI
2-methylisocitrate dehydratase, Fe/S-dependent {ECO:0000313|EMBL:EKY24515.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
aconitate hydratase
SCN18_25_8_15_R2_B_scaffold_996_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24129..24533
DNA (405bp) protein (135aa)
Thioesterase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q982_BREDI
Thioesterase family protein {ECO:0000313|EMBL:EKY24513.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
thioesterase superfamily protein
SCN18_25_8_15_R2_B_scaffold_996_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24544..25701
DNA (1158bp) protein (386aa)
2-methylcitrate synthase/citrate synthase ii (EC:2.3.3.5)
Citrate synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QA55_BREDI
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_996_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25763..26686
DNA (924bp) protein (308aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
2,3-dimethylmalate lyase (EC:4.1.3.32)
Methylisocitrate lyase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9B6_BREDI
SCN18_25_8_15_R2_B_scaffold_996_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26789..27580)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGQ6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27199.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
kinase-like protein
SCN18_25_8_15_R2_B_scaffold_996_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27582..27902)
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZQ6_BREDI
2Fe-2S ferredoxin {ECO:0000313|EMBL:EGF95993.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ferredoxin, 2Fe-2S
SCN18_25_8_15_R2_B_scaffold_996_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28018..28815)
DNA (798bp) protein (266aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGX4_BREDI
SCN18_25_8_15_R2_B_scaffold_996_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28828..30612)
DNA (1785bp) protein (595aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHZ0_BREDI
succinate dehydrogenase, flavoprotein subunit
SCN18_25_8_15_R2_B_scaffold_996_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30620..31015)
DNA (396bp) protein (132aa)
Succinate dehydrogenase,hydrophobic membrane anchor protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZQ4_BREDI
Succinate dehydrogenase,hydrophobic membrane anchor protein {ECO:0000313|EMBL:EGF95991.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
succinate dehydrogenase, hydrophobic membrane anchor protein
SCN18_25_8_15_R2_B_scaffold_996_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31012..31473)
DNA (462bp) protein (154aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZQ3_BREDI
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EGF95990.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
succinate dehydrogenase, cytochrome b556 subunit
SCN18_25_8_15_R2_B_scaffold_996_27
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31602..32027)
DNA (426bp) protein (142aa)
Histidine triad domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHQ4_BREDI
Histidine triad domain protein {ECO:0000313|EMBL:EKY27205.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
histidine triad (HIT) protein
SCN18_25_8_15_R2_B_scaffold_996_28
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32154..32975
DNA (822bp) protein (274aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Malate dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGX9_BREDI
malate dehydrogenase
Displaying 28 items

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