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SCN18_25_8_15_R2_B_scaffold_1205

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1205_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)
Uncharacterized protein (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ37_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30036.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_1205_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

479..1909
DNA (1431bp) protein (477aa)
TldD/PmbA family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAD3_BREDI
TldD/PmbA family protein {ECO:0000313|EMBL:EKY24680.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
peptidase U62 modulator of DNA gyrase
SCN18_25_8_15_R2_B_scaffold_1205_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1938..2771)
DNA (834bp) protein (278aa)
GumN protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDD7_9CAUL
GumN family protein
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCN18_25_8_15_R2_B_scaffold_1205_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3027..5072
DNA (2046bp) protein (682aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAN5_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY24682.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB-dependent receptor plug
SCN18_25_8_15_R2_B_scaffold_1205_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5211..6989)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036F0B8C
peptide transporter
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1205_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7196..8347
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWV5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95509.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1205_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8344..8757)
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9T5_BREDI
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
large conductance mechanosensitive channel protein
SCN18_25_8_15_R2_B_scaffold_1205_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8783..9073)
DNA (291bp) protein (97aa)
Integration host factor subunit beta n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAP2_BREDI
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
integration host factor subunit beta
SCN18_25_8_15_R2_B_scaffold_1205_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9596..11806
DNA (2211bp) protein (737aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R973_PELHB
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDP53467.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
methyl-accepting chemotaxis protein
SCN18_25_8_15_R2_B_scaffold_1205_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12354..14051)
DNA (1698bp) protein (566aa)
30S ribosomal protein S1 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9N7_BREDI
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
30S ribosomal protein S1
SCN18_25_8_15_R2_B_scaffold_1205_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14237..14881)
DNA (645bp) protein (215aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAE5_BREDI
SCN18_25_8_15_R2_B_scaffold_1205_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14878..16218)
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWW1_BREDI
SCN18_25_8_15_R2_B_scaffold_1205_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..16814
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWW2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95516.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1205_trna_1
unknown

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16945..17017
DNA (73bp)
transferRNA Ala
SCN18_25_8_15_R2_B_scaffold_1205_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17291..18901)
DNA (1611bp) protein (537aa)
resolvase n=1 Tax=alpha proteobacterium L41A RepID=UPI00037BCF26
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB12682.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_25_8_15_R2_B_scaffold_1205_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18898..19308)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035EB693
Uncharacterized protein {ECO:0000313|EMBL:EKS41463.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1205_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19308..19562)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000382A36E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG67546.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
SCN18_25_8_15_R2_B_scaffold_1205_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..19979)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000371C0F4
SCN18_25_8_15_R2_B_scaffold_1205_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19979..20662)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035F1338
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_25_8_15_R2_B_scaffold_1205_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20718..21629)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037CE4B4
Putative transcriptional regulator {ECO:0000313|EMBL:CCD32129.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1205_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21763..22911
DNA (1149bp) protein (383aa)
Putative patatin-like phospholipase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HR44_GLUDA
patatin-like phospholipase
Putative patatin-like phospholipase {ECO:0000313|EMBL:CAP56836.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_25_8_15_R2_B_scaffold_1205_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22915..23961
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000363CAC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP56835.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_25_8_15_R2_B_scaffold_1205_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23954..25792
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036283BF
Putative ubiquitin-activating enzyme {ECO:0000313|EMBL:CCD32132.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
ubiquitin-activating enzyme
SCN18_25_8_15_R2_B_scaffold_1205_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26112..26444
DNA (333bp) protein (111aa)
Fis family transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI000369E177
Endonuclease {ECO:0000313|EMBL:KAJ35033.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
DNA mismatch endonuclease Vsr
SCN18_25_8_15_R2_B_scaffold_1205_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26441..26740
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI0003615B86
DNA-cytosine methyltransferase
DNA-cytosine methyltransferase {ECO:0000313|EMBL:ADL01343.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Displaying 25 items

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