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SCN18_25_8_15_R2_B_scaffold_1347

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1347_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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95..937
DNA (843bp) protein (281aa)
30S ribosomal protein S2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R194_BREDI
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S2
SCN18_25_8_15_R2_B_scaffold_1347_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1039..1977
DNA (939bp) protein (313aa)
Elongation factor Ts n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R195_BREDI
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
translation elongation factor Ts
SCN18_25_8_15_R2_B_scaffold_1347_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2250..2987
DNA (738bp) protein (246aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMU3_BREDI
SCN18_25_8_15_R2_B_scaffold_1347_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3028..3585
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R197_BREDI
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribosome recycling factor
SCN18_25_8_15_R2_B_scaffold_1347_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3620..4378
DNA (759bp) protein (253aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Isoprenyl transferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R198_BREDI
undecaprenyl diphosphate synthase
SCN18_25_8_15_R2_B_scaffold_1347_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4380..5198
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Phosphatidate cytidylyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R199_BREDI
phosphatidate cytidylyltransferase
SCN18_25_8_15_R2_B_scaffold_1347_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5195..6391
DNA (1197bp) protein (399aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A0_BREDI
SCN18_25_8_15_R2_B_scaffold_1347_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6414..7631
DNA (1218bp) protein (406aa)
RIP metalloprotease RseP n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMU6_BREDI
RIP metalloprotease RseP {ECO:0000313|EMBL:EKY29304.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
membrane-associated zinc metalloprotease
SCN18_25_8_15_R2_B_scaffold_1347_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7649..10063
DNA (2415bp) protein (805aa)
Outer membrane protein assembly factor BamA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNP7_BREDI
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
outer membrane protein assembly complex, YaeT protein
SCN18_25_8_15_R2_B_scaffold_1347_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10098..10682
DNA (585bp) protein (195aa)
Outer membrane protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QN22_BREDI
Outer membrane protein {ECO:0000313|EMBL:EKY29306.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
outer membrane chaperone Skp
SCN18_25_8_15_R2_B_scaffold_1347_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10691..11710
DNA (1020bp) protein (340aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QP33_BREDI
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
SCN18_25_8_15_R2_B_scaffold_1347_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11707..12171
DNA (465bp) protein (155aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A5_BREDI
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
SCN18_25_8_15_R2_B_scaffold_1347_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12168..12968
DNA (801bp) protein (267aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-acyl-carrier-protein-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A6_BREDI
SCN18_25_8_15_R2_B_scaffold_1347_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12965..13804
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNQ2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY29310.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1347_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13801..14967
DNA (1167bp) protein (389aa)
Lipid-A-disaccharide synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QN26_BREDI
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EKY29311.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
lipid-A-disaccharide synthase
SCN18_25_8_15_R2_B_scaffold_1347_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15127..15930)
DNA (804bp) protein (268aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1A9_BREDI
trpC; indole-3-glycerol phosphate synthase
SCN18_25_8_15_R2_B_scaffold_1347_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15930..16964)
DNA (1035bp) protein (345aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B0_BREDI
anthranilate phosphoribosyltransferase
SCN18_25_8_15_R2_B_scaffold_1347_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16964..17554)
DNA (591bp) protein (197aa)
Anthranilate synthase component 2 {ECO:0000313|EMBL:EGF94238.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EGF94238.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Anthranilate synthase component 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B1_BREDI
glutamine amidotransferase
SCN18_25_8_15_R2_B_scaffold_1347_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17862..19394)
DNA (1533bp) protein (511aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNH2_BREDI
Anthranilate synthase component I {ECO:0000313|EMBL:EKY29117.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_1347_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19394..21304)
DNA (1911bp) protein (637aa)
Rotamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B4_BREDI
Rotamase family protein {ECO:0000313|EMBL:EGF94241.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
rotamase family protein
SCN18_25_8_15_R2_B_scaffold_1347_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21435..22184
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QM97_BREDI
SCN18_25_8_15_R2_B_scaffold_1347_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22259..22675
DNA (417bp) protein (139aa)
Preprotein translocase, SecG subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B6_BREDI
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EGF94243.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
preprotein translocase subunit SecG
SCN18_25_8_15_R2_B_scaffold_1347_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22799..24025
DNA (1227bp) protein (409aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B7_BREDI
Displaying 23 items

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