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SCN18_25_8_15_R2_B_scaffold_1349

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1349_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S3_BREDI
holo-acyl-carrier-protein synthase
SCN18_25_8_15_R2_B_scaffold_1349_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188..946)
DNA (759bp) protein (253aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S4_BREDI
pdxJ; pyridoxine 5'-phosphate synthase
SCN18_25_8_15_R2_B_scaffold_1349_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(961..1545)
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S5_BREDI
SCN18_25_8_15_R2_B_scaffold_1349_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1598..2377)
DNA (780bp) protein (260aa)
Putative lysine decarboxylase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S6_BREDI
Putative lysine decarboxylase family protein {ECO:0000313|EMBL:EGF94949.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1349_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..4673)
DNA (2262bp) protein (754aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S7_BREDI
RelA/SpoT family protein {ECO:0000313|EMBL:EGF94950.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_1349_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4733..5092)
DNA (360bp) protein (120aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFW2_BREDI
DNA-directed RNA polymerase subunit omega
SCN18_25_8_15_R2_B_scaffold_1349_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5223..5786)
DNA (564bp) protein (188aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EGF94952.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EGF94952.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S9_BREDI
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SCN18_25_8_15_R2_B_scaffold_1349_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5809..6390
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94953.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1349_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6387..7031
DNA (645bp) protein (215aa)
Uracil-DNA glycosylase, family 4 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGR7_BREDI
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EKY26845.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
uracil-DNA glycosylase superfamily protein
SCN18_25_8_15_R2_B_scaffold_1349_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7177..8349)
DNA (1173bp) protein (391aa)
N-acetylmuramoyl-L-alanine amidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T2_BREDI
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EGF94955.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cell wall hydrolase/autolysin
SCN18_25_8_15_R2_B_scaffold_1349_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..11505
DNA (2664bp) protein (888aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Ribonuclease E n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T3_BREDI
ribonuclease, Rne/Rng family
SCN18_25_8_15_R2_B_scaffold_1349_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..12981
DNA (1422bp) protein (474aa)
Peptidase family M48 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T4_BREDI
Peptidase family M48 family protein {ECO:0000313|EMBL:EGF94957.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase M48 Ste24p
SCN18_25_8_15_R2_B_scaffold_1349_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13022..13870
DNA (849bp) protein (283aa)
DSBA-like thioredoxin domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T5_BREDI
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:EGF94958.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DSBA oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1349_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14037..14825)
DNA (789bp) protein (263aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Thiazole synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFS0_BREDI
thiG; thiazole synthase
SCN18_25_8_15_R2_B_scaffold_1349_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..15214)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFV1_BREDI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EKY26838.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
thiamine biosynthesis protein ThiS
SCN18_25_8_15_R2_B_scaffold_1349_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15309..15962)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J532_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R2_B_scaffold_1349_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15959..16432)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KET7_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R2_B_scaffold_1349_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16429..16707)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K5J9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31944.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1349_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16925..17380
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U0_BREDI
SCN18_25_8_15_R2_B_scaffold_1349_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17422..17910
DNA (489bp) protein (163aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U1_BREDI
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EGF94964.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
SCN18_25_8_15_R2_B_scaffold_1349_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17916..19268
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EGF94965.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EGF94965.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U2_BREDI
acetyl-CoA carboxylase
SCN18_25_8_15_R2_B_scaffold_1349_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19278..19973
DNA (696bp) protein (232aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFU7_BREDI
SCN18_25_8_15_R2_B_scaffold_1349_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19940..20614)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94967.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1349_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20611..21099)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94968.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
NADH:ubiquinone oxidoreductase 17.2 kD subunit
SCN18_25_8_15_R2_B_scaffold_1349_25
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21223..23850
DNA (2628bp) protein (876aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLQ3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28856.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ribonucleotide reductase
SCN18_25_8_15_R2_B_scaffold_1349_26
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23935..24009
DNA (75bp) protein (25aa)
Displaying 26 items

View Taxonomy