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SCN18_25_8_15_R2_B_scaffold_1426

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1426_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..289)
DNA (288bp) protein (96aa)
Esterase superfamily n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUV5_BREDI
Esterase superfamily {ECO:0000313|EMBL:EGF96384.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_1426_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..1415
DNA (1059bp) protein (353aa)
HmuU protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUV6_BREDI
HmuU protein {ECO:0000313|EMBL:EGF96385.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
transporter permease
SCN18_25_8_15_R2_B_scaffold_1426_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1412..2200
DNA (789bp) protein (263aa)
ABC transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUV7_BREDI
ABC transporter family protein {ECO:0000313|EMBL:EGF96386.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_1426_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2430..3500)
DNA (1071bp) protein (357aa)
PQQ enzyme repeat protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QN11_BREDI
PQQ enzyme repeat protein {ECO:0000313|EMBL:EKY29358.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
40-residue YVTN family beta-propeller repeat-containing protein
SCN18_25_8_15_R2_B_scaffold_1426_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3521..4660)
DNA (1140bp) protein (380aa)
Periplasmic binding family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUV9_BREDI
Periplasmic binding family protein {ECO:0000313|EMBL:EGF96388.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1426_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4945..5358
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW3_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96392.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1426_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6432)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EGF96395.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EGF96395.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Alcohol dehydrogenase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW6_BREDI
alcohol dehydrogenase groes domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1426_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6499..8016)
DNA (1518bp) protein (506aa)
Acetaldehyde dehydrogenase 2 {ECO:0000313|EMBL:EGF96396.1}; EC=1.2.1.3 {ECO:0000313|EMBL:EGF96396.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Acetaldehyde dehydrogenase 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW7_BREDI
aldehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1426_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8165..9136)
DNA (972bp) protein (324aa)
GAF domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDP0_9CAUL
GAF domain protein {ECO:0000313|EMBL:EDX79417.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
Fis family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1426_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9210..9635)
DNA (426bp) protein (142aa)
Rrf2 family protein transcriptional regulator family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW8_BREDI
Rrf2 family protein transcriptional regulator family protein {ECO:0000313|EMBL:EGF96397.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
BadM/Rrf2 family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1426_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9760..10077
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUW9_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96398.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1426_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10130..11332
DNA (1203bp) protein (401aa)
Flavohemoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX0_BREDI
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|HAMAP-Rule:MF_01252}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
nitric oxide dioxygenase
SCN18_25_8_15_R2_B_scaffold_1426_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11376..11615)
DNA (240bp) protein (80aa)
Type 1 capsular polysaccharide biosynthesis protein J n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX1_BREDI
Type 1 capsular polysaccharide biosynthesis protein J {ECO:0000313|EMBL:EGF96400.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1426_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11727..12182)
DNA (456bp) protein (152aa)
Glutamate uptake regulatory protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX2_BREDI
Glutamate uptake regulatory protein {ECO:0000313|EMBL:EGF96401.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
AsnC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1426_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12217..13188)
DNA (972bp) protein (324aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBC0_BREDI
SCN18_25_8_15_R2_B_scaffold_1426_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13337..13978
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96403.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1426_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13982..15781
DNA (1800bp) protein (600aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX5_BREDI
SCN18_25_8_15_R2_B_scaffold_1426_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16026..17036
DNA (1011bp) protein (337aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX6_BREDI
SCN18_25_8_15_R2_B_scaffold_1426_19
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17152..17781)
DNA (630bp) protein (210aa)
Isochorismatase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAJ2_BREDI
Isochorismatase family protein {ECO:0000313|EMBL:EKY24984.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pncA; pyrazinamidase/nicotinamidase
SCN18_25_8_15_R2_B_scaffold_1426_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17786..18754)
DNA (969bp) protein (323aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUX9_BREDI
fructose-1,6-bisphosphatase
SCN18_25_8_15_R2_B_scaffold_1426_21
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19128..20237
DNA (1110bp) protein (370aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Aminomethyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAM3_BREDI
glycine cleavage system protein T
SCN18_25_8_15_R2_B_scaffold_1426_22
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20372..20737
DNA (366bp) protein (122aa)
Glycine cleavage system H protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBJ0_BREDI
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
glycine cleavage system protein H
SCN18_25_8_15_R2_B_scaffold_1426_23
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20916..22262
DNA (1347bp) protein (449aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUY2_BREDI
SCN18_25_8_15_R2_B_scaffold_1426_24
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22277..22411
DNA (135bp) protein (45aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Glycine dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBC9_BREDI
glycine cleavage system protein P
Displaying 24 items

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