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SCN18_25_8_15_R2_B_scaffold_1594

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1594_1
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1329
DNA (1329bp) protein (443aa)
NOL1/NOP2/sun family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0I3_BREDI
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EGF94112.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
fmu (sun) domain protein
SCN18_25_8_15_R2_B_scaffold_1594_2
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1326..2036
DNA (711bp) protein (237aa)
5'-methylthioadenosine nucleosidase (EC:3.2.2.9)
Putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLQ7_BREDI
Putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:EKY28507.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_1594_3
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2033..3595
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKP4_BREDI
GMP synthase, large subunit
SCN18_25_8_15_R2_B_scaffold_1594_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3886..5139
DNA (1254bp) protein (418aa)
Site-specific recombinase, phage integrase family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS33_BREDI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EKY30352.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
integrase
SCN18_25_8_15_R2_B_scaffold_1594_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5096..5386)
DNA (291bp) protein (97aa)
transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI0001003126
prophage CP4-57 regulator
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1594_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5529..5864
DNA (336bp) protein (112aa)
Transcriptional regulator, ArsR family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR23_BREDI
ArsR family transcriptional regulator
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1594_7
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5872..6297
DNA (426bp) protein (142aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
Arsenate reductase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBH0_9CAUL
arsenate reductase
SCN18_25_8_15_R2_B_scaffold_1594_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6294..7382
DNA (1089bp) protein (363aa)
Arsenical-resistance protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBH1_9CAUL
arsB2; Arsenite resistance protein ArsB
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1594_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7382..7801
DNA (420bp) protein (140aa)
Acetyltransferase, GNAT family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR41_BREDI
putative acetyltransferase
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1594_10
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7798..8553
DNA (756bp) protein (252aa)
Arsenical resistance protein ArsH n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRR7_BREDI
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EKY30370.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
arsenate resistance ArsH
SCN18_25_8_15_R2_B_scaffold_1594_11
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8740..9849)
DNA (1110bp) protein (370aa)
Toxin-antitoxin system, toxin component, Fic family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQV0_BREDI
Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EKY30369.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
filamentation induced by cAMP protein fic
SCN18_25_8_15_R2_B_scaffold_1594_12
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10078..12009)
DNA (1932bp) protein (644aa)
Cytochrome n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS47_BREDI
Cytochrome {ECO:0000313|EMBL:EKY30367.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
iron permease FTR1
SCN18_25_8_15_R2_B_scaffold_1594_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12173..13582)
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBH6_9CAUL
SCN18_25_8_15_R2_B_scaffold_1594_14
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13646..14905)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBH7_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX80366.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
fatty acid alpha hydroxylase, cytochrome P450
SCN18_25_8_15_R2_B_scaffold_1594_15
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15069..15503)
DNA (435bp) protein (145aa)
Transcriptional regulator, MerR family n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ATT4_9CAUL
MerR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_25_8_15_R2_B_scaffold_1594_16
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15558..16100)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZAP8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KDP94875.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1594_17
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16097..16621)
DNA (525bp) protein (175aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
Lipoprotein signal peptidase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBI0_9CAUL
lipoprotein signal peptidase (modular protein)
SCN18_25_8_15_R2_B_scaffold_1594_18
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16779..17429
DNA (651bp) protein (217aa)
Cobalt-zinc-cadmium resistance protein CzcD n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z9J8_9CAUL
cation efflux protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_25_8_15_R2_B_scaffold_1594_19
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17426..18076
DNA (651bp) protein (217aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Caulobacter sp. AP07 RepID=J2GLV0_9CAUL
type 11 methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_25_8_15_R2_B_scaffold_1594_20
unknown

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18085..18474
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1594_21
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18528..19784
DNA (1257bp) protein (419aa)
transporter n=1 Tax=alpha proteobacterium L41A RepID=UPI00035D9214
outer membrane efflux protein
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCN18_25_8_15_R2_B_scaffold_1594_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19784..19882
DNA (99bp) protein (33aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9G0_BREDI
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKY24350.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Displaying 22 items

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