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SCN18_25_8_15_R2_B_scaffold_2055

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2055_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..935)
DNA (933bp) protein (311aa)
General secretion pathway protein F n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRD1_BREDI
General secretion pathway protein F {ECO:0000313|EMBL:EKY30112.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsF; type II secretion system protein F
SCN18_25_8_15_R2_B_scaffold_2055_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(935..2428)
DNA (1494bp) protein (498aa)
General secretory pathway protein E n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R206_BREDI
General secretory pathway protein E {ECO:0000313|EMBL:EGF95146.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
xcsE; type II secretion system protein E
SCN18_25_8_15_R2_B_scaffold_2055_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2425..4554)
DNA (2130bp) protein (710aa)
General secretion pathway protein D n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R207_BREDI
General secretion pathway protein D {ECO:0000313|EMBL:EGF95147.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
general secretion pathway protein D
SCN18_25_8_15_R2_B_scaffold_2055_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4551..5393)
DNA (843bp) protein (281aa)
Putative general secretion pathway protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQY5_BREDI
Putative general secretion pathway protein {ECO:0000313|EMBL:EKY30115.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsC; type II secretion system protein C
SCN18_25_8_15_R2_B_scaffold_2055_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5608..8298)
DNA (2691bp) protein (897aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQB3_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY30116.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB-dependent receptor plug
SCN18_25_8_15_R2_B_scaffold_2055_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8388..9893)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R210_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95150.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2055_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10277..11722
DNA (1446bp) protein (482aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.3)
Putative aldehyde dehydrogenase DhaS n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD44_BREDI
Putative aldehyde dehydrogenase DhaS {ECO:0000313|EMBL:EKY25889.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCN18_25_8_15_R2_B_scaffold_2055_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11741..12505
DNA (765bp) protein (255aa)
Alcohol dehydrogenase TsaC2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R293_BREDI
Alcohol dehydrogenase TsaC2 {ECO:0000313|EMBL:EGF95155.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
fabG; 3-ketoacyl-ACP reductase
SCN18_25_8_15_R2_B_scaffold_2055_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12489..13601
DNA (1113bp) protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R294_BREDI
SCN18_25_8_15_R2_B_scaffold_2055_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14898
DNA (1287bp) protein (429aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE81_BREDI
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EKY25892.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
putative acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
SCN18_25_8_15_R2_B_scaffold_2055_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14903..15424
DNA (522bp) protein (174aa)
Helix-turn-helix family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R296_BREDI
Helix-turn-helix family protein {ECO:0000313|EMBL:EGF95158.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
XRE family transcriptional regulator
Displaying 11 items

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