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SCN18_25_8_15_R2_B_scaffold_2165

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2165_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..354)
DNA (354bp) protein (118aa)
TadE family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH9_BREDI
TadE family protein {ECO:0000313|EMBL:EGF95867.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TadE family protein
SCN18_25_8_15_R2_B_scaffold_2165_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351..821)
DNA (471bp) protein (157aa)
TadE-like family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH8_BREDI
TadE-like family protein {ECO:0000313|EMBL:EGF95866.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TadE family protein
SCN18_25_8_15_R2_B_scaffold_2165_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(877..1275)
DNA (399bp) protein (133aa)
PilQ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH7_BREDI
PilQ {ECO:0000313|EMBL:EGF95865.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
CpaC-related secretion pathway protein
SCN18_25_8_15_R2_B_scaffold_2165_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1564..1737
DNA (174bp) protein (58aa)
Flp/Fap pilin component family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH6_BREDI
Flp/Fap pilin component family protein {ECO:0000313|EMBL:EGF95864.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Flp/Fap pilin component
SCN18_25_8_15_R2_B_scaffold_2165_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1851..2363
DNA (513bp) protein (171aa)
Peptidase, A24 family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR39_BREDI
Peptidase, A24 family {ECO:0000313|EMBL:EKY30493.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
peptidase A24A prepilin type IV
SCN18_25_8_15_R2_B_scaffold_2165_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2483..3442
DNA (960bp) protein (320aa)
Flp pilus assembly protein CpaB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH4_BREDI
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EGF95862.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Flp pilus assembly protein CpaB
SCN18_25_8_15_R2_B_scaffold_2165_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3451..5013
DNA (1563bp) protein (521aa)
Bacterial type II and III secretion system family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH3_BREDI
Bacterial type II and III secretion system family protein {ECO:0000313|EMBL:EGF95861.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II and III secretion system protein
SCN18_25_8_15_R2_B_scaffold_2165_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5019..5693
DNA (675bp) protein (225aa)
Pilus biogenesis lipoprotein CpaD n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS08_BREDI
Pilus biogenesis lipoprotein CpaD {ECO:0000313|EMBL:EKY30490.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pilus biogenesis lipoprotein CpaD
SCN18_25_8_15_R2_B_scaffold_2165_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5690..7231
DNA (1542bp) protein (514aa)
Pilus assembly protein CpaE family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR63_BREDI
Pilus assembly protein CpaE family protein {ECO:0000313|EMBL:EKY30489.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pilus assembly ATPase CpaE
SCN18_25_8_15_R2_B_scaffold_2165_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7536..8819
DNA (1284bp) protein (428aa)
CpaF n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH1_BREDI
CpaF {ECO:0000313|EMBL:EGF95859.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system protein E
SCN18_25_8_15_R2_B_scaffold_2165_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8825..9805
DNA (981bp) protein (327aa)
Bacterial type II secretion system protein F domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYH0_BREDI
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:EGF95858.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system F domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2165_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9822..10811
DNA (990bp) protein (330aa)
Bacterial type II secretion system protein F domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG9_BREDI
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:EGF95857.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system F domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2165_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10831..11265)
DNA (435bp) protein (145aa)
Polyketide cyclase / dehydrase and lipid transport family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG8_BREDI
Polyketide cyclase / dehydrase and lipid transport family protein {ECO:0000313|EMBL:EGF95856.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
polyketide cyclase/dehydrase
SCN18_25_8_15_R2_B_scaffold_2165_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11381..11722
DNA (342bp) protein (114aa)
Endoribonuclease L-PSP family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG7_BREDI
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:EGF95855.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
endoribonuclease L-PSP
SCN18_25_8_15_R2_B_scaffold_2165_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11724..11939
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95854.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2165_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11996..13189)
DNA (1194bp) protein (398aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG2_BREDI
succinyl-diaminopimelate desuccinylase
SCN18_25_8_15_R2_B_scaffold_2165_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13275..14594
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYG0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95848.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying 17 items

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