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SCN18_25_8_15_R2_B_scaffold_2286

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2286_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
Putative tonB-system energizer ExbB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDW7_BREDI
Putative tonB-system energizer ExbB {ECO:0000313|EMBL:EKY25855.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
exbB; TonB accessory protein exbB
SCN18_25_8_15_R2_B_scaffold_2286_trna_3
unknown

Not on your lists

comp(926..998)
DNA (73bp)
transferRNA Phe
SCN18_25_8_15_R2_B_scaffold_2286_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1084..1245)
DNA (162bp) protein (54aa)
DNA gyrase inhibitor YacG n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD43_BREDI
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1248..2258)
DNA (1011bp) protein (337aa)
RNA-binding S1 domain-containing protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ96_BREDI
RNA-binding S1 domain-containing protein {ECO:0000313|EMBL:EGF93978.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
RNA-binding protein AU-1/ribonuclease E/G
SCN18_25_8_15_R2_B_scaffold_2286_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2857)
DNA (600bp) protein (200aa)
Maf-like protein HMPREF0185_02688 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD07_BREDI
Maf-like protein HMPREF0185_02688 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
maf protein
SCN18_25_8_15_R2_B_scaffold_2286_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2866..3084)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Brevundimonas diminuta RepID=F4QZ95_BREDI
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
translation initiation factor 1 (IF-1)
SCN18_25_8_15_R2_B_scaffold_2286_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3191..3658)
DNA (468bp) protein (156aa)
Conserved hypothetical UPF0262 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ94_BREDI
Conserved hypothetical UPF0262 family protein {ECO:0000313|EMBL:EGF93976.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3655..4143)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD47_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25861.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4133..5422)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE61_BREDI
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
SCN18_25_8_15_R2_B_scaffold_2286_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5536..5721)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ91_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93973.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_2286_trna_1
unknown

Not on your lists

5820..5891
DNA (72bp)
transferRNA Thr
SCN18_25_8_15_R2_B_scaffold_2286_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6169..9456
DNA (3288bp) protein (1096aa)
Amidohydrolase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD19_BREDI
Amidohydrolase family protein {ECO:0000313|EMBL:EKY25864.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
WD-40-like repeat-containing amidohydrolase
SCN18_25_8_15_R2_B_scaffold_2286_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9585..10253)
DNA (669bp) protein (223aa)
SNARE-like domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDX2_BREDI
SNARE-like domain protein {ECO:0000313|EMBL:EKY25865.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10375..10959)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ82_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93964.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11009..11515)
DNA (507bp) protein (169aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE66_BREDI
SCN18_25_8_15_R2_B_scaffold_2286_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11588..13072)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ80_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93962.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_15
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13245..13649
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDX6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25870.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2286_16
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13625..14341)
DNA (717bp) protein (239aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lipoate-protein ligase B (EC:2.3.1.181)
Octanoyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYS9_BREDI
SCN18_25_8_15_R2_B_scaffold_2286_17
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..14659
DNA (252bp) protein (84aa)
Flagellar motor switch protein fliN n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYS8_BREDI
Flagellar motor switch protein fliN {ECO:0000313|EMBL:EGF93959.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
surface presentation of antigens (SPOA) protein
SCN18_25_8_15_R2_B_scaffold_2286_trna_2
unknown

Not on your lists

14757..14838
DNA (82bp)
transferRNA Leu
Displaying 20 items

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