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SCN18_25_8_15_R2_B_scaffold_2304

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2304_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..482)
DNA (480bp) protein (160aa)
Efflux ABC transporter, permease protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEA0_BREDI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EKY26020.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2304_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(479..1234)
DNA (756bp) protein (252aa)
Cell division ATP-binding protein FtsE n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDG6_BREDI
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EKY26019.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ABC transporter
SCN18_25_8_15_R2_B_scaffold_2304_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1304..2092
DNA (789bp) protein (263aa)
MJ0042 family finger-like domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDG1_BREDI
MJ0042 family finger-like domain protein {ECO:0000313|EMBL:EKY26018.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2304_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2201..2740
DNA (540bp) protein (180aa)
Putative hypoxanthine phosphoribosyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEJ9_BREDI
Putative hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EKY26017.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
phosphoribosyltransferase
SCN18_25_8_15_R2_B_scaffold_2304_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2980..4269)
DNA (1290bp) protein (430aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Diaminopimelate decarboxylase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDK1_BREDI
diaminopimelate decarboxylase
SCN18_25_8_15_R2_B_scaffold_2304_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4307..4543)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXN7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95735.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_2304_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5970)
DNA (1431bp) protein (477aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Argininosuccinate lyase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDN3_BREDI
argininosuccinate lyase
SCN18_25_8_15_R2_B_scaffold_2304_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5999..6595
DNA (597bp) protein (199aa)
Antioxidant, AhpC/TSA family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEP1_BREDI
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EKY26057.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
redoxin
SCN18_25_8_15_R2_B_scaffold_2304_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6772..7077)
DNA (306bp) protein (102aa)
50S ribosomal protein L7/L12 domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE91_BREDI
50S ribosomal protein L7/L12 domain protein {ECO:0000313|EMBL:EKY26010.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
transporter
SCN18_25_8_15_R2_B_scaffold_2304_trna_1
unknown

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7270..7343
DNA (74bp)
transferRNA Arg
SCN18_25_8_15_R2_B_scaffold_2304_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7525..8397
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVE4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96573.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2304_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8385..9644)
DNA (1260bp) protein (420aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
D-amino acid dehydrogenase small subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWW7_BREDI
dadA; D-amino acid dehydrogenase small subunit
SCN18_25_8_15_R2_B_scaffold_2304_12
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..11514)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9R9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY24703.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
putative MFS permease
SCN18_25_8_15_R2_B_scaffold_2304_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11532..12692
DNA (1161bp) protein (387aa)
UPF0176 protein HMPREF0185_03155 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAQ7_BREDI
UPF0176 protein HMPREF0185_03155 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
rhodanese
SCN18_25_8_15_R2_B_scaffold_2304_14
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13032..13763
DNA (732bp) protein (244aa)
Acyl-CoA dehydrogenase (EC:1.3.99.3)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWW3_BREDI
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EGF95517.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Displaying 15 items

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