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SCN18_25_8_15_R2_B_scaffold_2507

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2507_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..743)
DNA (741bp) protein (247aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGP5_BREDI
betA; Succinyl-CoA ligase [ADP-forming] subunit BetA
SCN18_25_8_15_R2_B_scaffold_2507_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(909..2276)
DNA (1368bp) protein (456aa)
Major Facilitator Superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ61_BREDI
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EGF95950.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
major facilitator transporter
SCN18_25_8_15_R2_B_scaffold_2507_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2412..4625)
DNA (2214bp) protein (738aa)
TonB-dependent receptor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGI2_BREDI
TonB-dependent receptor {ECO:0000313|EMBL:EKY27119.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_2507_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4804..5532
DNA (729bp) protein (243aa)
Bacterial regulatory protein, tetR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ64_BREDI
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF95953.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2507_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5529..6299
DNA (771bp) protein (257aa)
Response regulator receiver protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QKG6_BRESC
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADK99791.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_25_8_15_R2_B_scaffold_2507_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..7284)
DNA (981bp) protein (327aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHQ0_BREDI
Magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:EKY27117.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
corA1; Magnesium transport protein corA
SCN18_25_8_15_R2_B_scaffold_2507_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7507..8970)
DNA (1464bp) protein (488aa)
Lignostilbene-alpha,beta-dioxygenase and related enzymes n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AS48_9CAUL
Lignostilbene-alpha,beta-dioxygenase and related enzymes {ECO:0000313|EMBL:GAD60529.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Carotenoid oxygenase
SCN18_25_8_15_R2_B_scaffold_2507_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9426)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ65_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95954.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2507_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9635..10321
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHF2_BREDI
SCN18_25_8_15_R2_B_scaffold_2507_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10318..12132
DNA (1815bp) protein (605aa)
Heparinase II/III-like protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGH6_BREDI
Heparinase II/III-like protein {ECO:0000313|EMBL:EKY27114.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Heparinase II/III
SCN18_25_8_15_R2_B_scaffold_2507_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12129..12530)
DNA (402bp) protein (134aa)
GIY-YIG catalytic domain protein (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHI7_BREDI
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EKY27145.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
excinuclease ABC subunit C
Displaying 11 items

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