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SCN18_25_8_15_R2_B_scaffold_2827

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2827_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1419
DNA (1419bp) protein (473aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Carboxyl transferase domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ99_BREDI
Carboxyl transferase domain protein {ECO:0000313|EMBL:EGF93981.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_2827_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1485..2387
DNA (903bp) protein (301aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA0_BREDI
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EGF93982.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
enoyl-CoA hydratase/isomerase
SCN18_25_8_15_R2_B_scaffold_2827_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2397..4397
DNA (2001bp) protein (667aa)
Methylcrotonoyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:EGF93983.1}; EC=6.4.1.4 {ECO:0000313|EMBL:EGF93983.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Methylcrotonoyl-CoA carboxylase subunit alpha n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA1_BREDI
carbamoyl-phosphate synthase subunit L
SCN18_25_8_15_R2_B_scaffold_2827_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4422..4817)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367B068
antibiotic biosynthesis monooxygenase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R2_B_scaffold_2827_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4880..5275
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD34_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25846.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2827_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5339..6130
DNA (792bp) protein (264aa)
Multidrug resistance protein pmpM n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA3_BREDI
Multidrug resistance protein pmpM {ECO:0000313|EMBL:EGF93985.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
MATE efflux family protein
SCN18_25_8_15_R2_B_scaffold_2827_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6127..6681
DNA (555bp) protein (185aa)
MATE efflux family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDV7_BREDI
MATE efflux family protein {ECO:0000313|EMBL:EKY25845.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
MATE efflux family protein
SCN18_25_8_15_R2_B_scaffold_2827_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6782..8491
DNA (1710bp) protein (570aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA4_BREDI
SCN18_25_8_15_R2_B_scaffold_2827_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8665..9519)
DNA (855bp) protein (285aa)
Integral membrane protein TerC family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA6_BREDI
Integral membrane protein TerC family protein {ECO:0000313|EMBL:EGF93988.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
integral membrane protein TerC
SCN18_25_8_15_R2_B_scaffold_2827_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9592..10236)
DNA (645bp) protein (215aa)
RNA methyltransferase, TrmH family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD29_BREDI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EKY25841.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TrmH family RNA methyltransferase
SCN18_25_8_15_R2_B_scaffold_2827_trna_1
unknown

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10800..10870
DNA (71bp)
transferRNA Gly
SCN18_25_8_15_R2_B_scaffold_2827_11
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10934..11080
DNA (147bp) protein (49aa)
Elongation factor Tu n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQW0_BREDI
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
translation elongation factor Tu
Displaying 12 items

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