ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2869

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2869_1
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23..328
DNA (306bp) protein (102aa)
SCP-2 sterol transfer family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPY9_BREDI
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EGF94901.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
sterol-binding domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2869_2
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

408..1610
DNA (1203bp) protein (401aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R077_BREDI
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EGF94900.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acyl-CoA dehydrogenase
SCN18_25_8_15_R2_B_scaffold_2869_3
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1624..1824)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R076_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94899.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCN18_25_8_15_R2_B_scaffold_2869_4
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..2490)
DNA (606bp) protein (202aa)
RNA polymerase sigma factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R075_BREDI
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ECF subfamily RNA polymerase sigma-70 factor
SCN18_25_8_15_R2_B_scaffold_2869_5
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2680..4845
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R074_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94897.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
methyltransferase
SCN18_25_8_15_R2_B_scaffold_2869_6
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4960..5193)
DNA (234bp) protein (78aa)
Stress-induced bacterial acidophilic repeat motif family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R073_BREDI
Stress-induced bacterial acidophilic repeat motif family protein {ECO:0000313|EMBL:EGF94896.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
KGG repeat-containing stress-induced protein
SCN18_25_8_15_R2_B_scaffold_2869_7
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5378..5674
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R072_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94895.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2869_8
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5676..6377)
DNA (702bp) protein (234aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R071_BREDI
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EGF94894.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
beta-lactamase
SCN18_25_8_15_R2_B_scaffold_2869_9
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6424..7893
DNA (1470bp) protein (490aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Trigger factor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R070_BREDI
trigger factor
SCN18_25_8_15_R2_B_scaffold_2869_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8083..8973
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AMK6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58919.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2869_11
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9087..9728
DNA (642bp) protein (214aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R068_BREDI
SCN18_25_8_15_R2_B_scaffold_2869_12
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9831..10373
DNA (543bp) protein (181aa)
Prokaryotic cytochrome b561 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R067_BREDI
Prokaryotic cytochrome b561 family protein {ECO:0000313|EMBL:EGF94890.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cytochrome B561
SCN18_25_8_15_R2_B_scaffold_2869_13
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10421..10951)
DNA (531bp) protein (177aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA topoisomerase IV subunit beta (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R066_BREDI
Displaying 13 items

View Taxonomy