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SCN18_25_8_15_R2_B_scaffold_4404

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4404_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(145..603)
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QJU6_BREDI
Endoribonuclease L-PSP {ECO:0000313|EMBL:EKY28221.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
endoribonuclease L-PSP
SCN18_25_8_15_R2_B_scaffold_4404_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(659..1933)
DNA (1275bp) protein (425aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKI8_BREDI
SCN18_25_8_15_R2_B_scaffold_4404_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2057..2434
DNA (378bp) protein (126aa)
Response regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZZ2_BREDI
Response regulator {ECO:0000313|EMBL:EGF94071.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
response regulator receiver protein
SCN18_25_8_15_R2_B_scaffold_4404_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2431..3792
DNA (1362bp) protein (454aa)
Diguanylate cyclase GGDEF domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZZ3_BREDI
Diguanylate cyclase GGDEF domain protein {ECO:0000313|EMBL:EGF94072.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
response regulator receiver modulated diguanylate cyclase
SCN18_25_8_15_R2_B_scaffold_4404_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3885..4052)
DNA (168bp) protein (56aa)
Ribosomal protein L33 n=2 Tax=Brevundimonas diminuta RepID=L1QKX0_BREDI
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
50S ribosomal protein L33
SCN18_25_8_15_R2_B_scaffold_4404_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4179..4793
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QJU2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28216.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_4404_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4812..5519)
DNA (708bp) protein (236aa)
Hydrolase, NUDIX family (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKI3_BREDI
Hydrolase, NUDIX family {ECO:0000313|EMBL:EKY28215.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
NUDIX hydrolase
SCN18_25_8_15_R2_B_scaffold_4404_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5575..6903)
DNA (1329bp) protein (443aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QL09_BREDI
Displaying 8 items

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