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SCN18_25_8_15_R2_B_scaffold_761

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_761_1
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..208
DNA (207bp) protein (69aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4F8_9SPHN
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
SCN18_25_8_15_R2_B_scaffold_761_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216..758)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EE9489
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
SCN18_25_8_15_R2_B_scaffold_761_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(858..2024)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87849.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
membrane protein
SCN18_25_8_15_R2_B_scaffold_761_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..2812)
DNA (786bp) protein (262aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIL96978.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EIL96978.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY7_9GAMM
SCN18_25_8_15_R2_B_scaffold_761_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2937..3992)
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EQD34256.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
SCN18_25_8_15_R2_B_scaffold_761_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3994..5832)
DNA (1839bp) protein (613aa)
Putative 2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XLJ9_VARPD
putative 2-oxoacid:acceptor oxidoreductase, alpha subunit
Putative 2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AGU53159.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_8_15_R2_B_scaffold_761_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..7714)
DNA (1854bp) protein (618aa)
glutamate synthase (nadph) (EC:1.4.1.13)
glutamate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D3496
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_25_8_15_R2_B_scaffold_761_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8005..9732
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAS9_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70999.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_25_8_15_R2_B_scaffold_761_9
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9907..11019
DNA (1113bp) protein (371aa)
DNA repair photolyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU93_9GAMM
DNA repair photolyase {ECO:0000313|EMBL:EIL90784.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair photolyase
SCN18_25_8_15_R2_B_scaffold_761_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11057..11401
DNA (345bp) protein (115aa)
aldehyde-activating protein n=1 Tax=Nevskia ramosa RepID=UPI0003B68A94
Uncharacterized protein {ECO:0000313|EMBL:KFN48218.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
aldehyde-activating protein
SCN18_25_8_15_R2_B_scaffold_761_11
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11690..12178
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00036950A0
N-acetyltransferase GCN5 {ECO:0000313|EMBL:CEA00879.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
histone acetyltransferase HPA2/related acetyltransferase
SCN18_25_8_15_R2_B_scaffold_761_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..12671
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Xanthomonas RepID=K8G1I5_9XANT
Membrane protein {ECO:0000313|EMBL:EYR67031.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_761_13
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12740..13549)
DNA (810bp) protein (270aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFZ1_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL98382.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
negative regulator of beta-lactamase expression
SCN18_25_8_15_R2_B_scaffold_761_14
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13546..14004)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI00037449D7
Uncharacterized protein {ECO:0000313|EMBL:EQA46249.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_761_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14020..14787)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89970.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_761_16
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15002..16531)
DNA (1530bp) protein (510aa)
Putative ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W660_9GAMM
Putative ATP-binding protein {ECO:0000313|EMBL:EIL94951.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative ATPase
SCN18_25_8_15_R2_B_scaffold_761_17
scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, Plasmid-like

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comp(16637..17539)
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NGN3_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG88818.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_761_18
scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, scnpilot_dereplicated_Plasmid_Gammaproteobacteria_1, Plasmid-like

Not on your lists

17864..20923
DNA (3060bp) protein (1020aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=M4NDL3_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGG88819.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cation/multidrug efflux pump
SCN18_25_8_15_R2_B_scaffold_761_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20937..22994)
DNA (2058bp) protein (686aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU88_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL90779.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
SCN18_25_8_15_R2_B_scaffold_761_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23251..23532)
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=4960350 bin=GWC2_Syntrophobacterales_56_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:ABW35150.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
SCN18_25_8_15_R2_B_scaffold_761_21
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23545..26496)
DNA (2952bp) protein (984aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4R760_9BURK
HsdR family type I site-specific deoxyribonuclease
Tax=CG_Desulfob_01
SCN18_25_8_15_R2_B_scaffold_761_22
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26630..27418)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G331_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ52218.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
putative uncharacterized protein
SCN18_25_8_15_R2_B_scaffold_761_23
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27415..28251)
DNA (837bp) protein (279aa)
Restriction modification system DNA specificity domain n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S4B7_PROA2
restriction modification system DNA specificity domain
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ACF45365.1}; TaxID=290512 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Prosthecochloris.;" source="Prosthecochloris aestuarii (strain DSM 271 / SK 413).;"
SCN18_25_8_15_R2_B_scaffold_761_24
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29010..30821)
DNA (1812bp) protein (604aa)
N-6 DNA methylase id=4960344 bin=GWC2_Syntrophobacterales_56_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
N-6 DNA methylase
Tax=CG_Delta_05
SCN18_25_8_15_R2_B_scaffold_761_25
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30970..31251
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NSP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF93761.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_761_26
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31414..32784
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000374BE8F
Transporter, major facilitator family protein {ECO:0000313|EMBL:KDD56878.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
inner membrane protein
SCN18_25_8_15_R2_B_scaffold_761_27
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32781..33725
DNA (945bp) protein (315aa)
Oxidoreductase n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8AX67_9ALTE
Oxidoreductase {ECO:0000313|EMBL:EON90943.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
oxidoreductase
SCN18_25_8_15_R2_B_scaffold_761_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33872..34150
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000371FC82
Uncharacterized protein {ECO:0000313|EMBL:KIF21629.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
protein of unknown function DUF1778
SCN18_25_8_15_R2_B_scaffold_761_29
unknown

Not on your lists

comp(34276..34665)
DNA (390bp) protein (130aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_761_30
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34703..35221)
DNA (519bp) protein (173aa)
Peroxiredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD0_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG89595.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 37 in total

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