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SCN18_25_8_15_R2_B_scaffold_1396

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1396_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..130)
DNA (129bp) protein (43aa)
SCN18_25_8_15_R2_B_scaffold_1396_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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830..2704
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP3_9GAMM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein
SCN18_25_8_15_R2_B_scaffold_1396_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2803..3570
DNA (768bp) protein (256aa)
Putative membrane protein/domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM56_9GAMM
putative membrane protein/domain protein
Putative membrane protein/domain protein {ECO:0000313|EMBL:AGG90743.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1396_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3774..5786
DNA (2013bp) protein (671aa)
Phospholipase/lecithinase/hemolysin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP6_9GAMM
Phospholipase/lecithinase/hemolysin {ECO:0000313|EMBL:EIL89537.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transporter
SCN18_25_8_15_R2_B_scaffold_1396_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5996..6223
DNA (228bp) protein (76aa)
SCN18_25_8_15_R2_B_scaffold_1396_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6502..8739
DNA (2238bp) protein (746aa)
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFB8_9GAMM
isocitrate dehydrogenase, NADP-dependent, monomeric type
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1396_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8746..9726)
DNA (981bp) protein (327aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P8_9GAMM
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIL93739.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
SCN18_25_8_15_R2_B_scaffold_1396_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9826..10038)
DNA (213bp) protein (71aa)
SCN18_25_8_15_R2_B_scaffold_1396_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10262..11182)
DNA (921bp) protein (307aa)
Biotin transporter BioY n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KT80_STEMA
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:KGQ18391.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
LysR family regulatory protein
SCN18_25_8_15_R2_B_scaffold_1396_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11293..12360
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX36_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04850.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_25_8_15_R2_B_scaffold_1396_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12505..13140
DNA (636bp) protein (212aa)
Glutathione-s-transferase theta, gst, putative {ECO:0000313|EMBL:EEF26524.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EEF26524.1};; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
Glutathione-s-transferase theta, gst, putative n=1 Tax=Ricinus communis RepID=B9TC88_RICCO
gstA3; glutathione S-transferase
SCN18_25_8_15_R2_B_scaffold_1396_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13303..14424
DNA (1122bp) protein (374aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC2_9GAMM
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1396_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14760..15680
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS1_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG90790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1396_14
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15715..16248
DNA (534bp) protein (178aa)
pseudouridine synthase family protein (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMS0_9GAMM
SCN18_25_8_15_R2_B_scaffold_1396_15
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16488..17270)
DNA (783bp) protein (261aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPJ3_9GAMM
Mg-dependent DNase {ECO:0000313|EMBL:EIL89134.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCN18_25_8_15_R2_B_scaffold_1396_16
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..17876)
DNA (495bp) protein (165aa)
SCN18_25_8_15_R2_B_scaffold_1396_17
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18088..19482)
DNA (1395bp) protein (465aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ93_9GAMM
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EIL89384.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA/RNA helicase, superfamily II
SCN18_25_8_15_R2_B_scaffold_1396_18
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19582..19932
DNA (351bp) protein (117aa)
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAD03583.1}; EC=4.1.2.25 {ECO:0000313|EMBL:GAD03583.1};; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
Dihydroneopterin aldolase n=1 Tax=Agarivorans albus MKT 106 RepID=R9PQM0_AGAAL
dihydroneopterin aldolase
SCN18_25_8_15_R2_B_scaffold_1396_19
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19925..20386
DNA (462bp) protein (154aa)
SCN18_25_8_15_R2_B_scaffold_1396_20
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20372..21118)
DNA (747bp) protein (249aa)
Pteridine reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQX1_9GAMM
Pteridine reductase {ECO:0000313|EMBL:KGO99521.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCN18_25_8_15_R2_B_scaffold_1396_21
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..21900)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W346_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93887.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1396_22
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22110..22904)
DNA (795bp) protein (265aa)
SCN18_25_8_15_R2_B_scaffold_1396_23
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23237..24289
DNA (1053bp) protein (351aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV04_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1396_24
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24354..25547
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03295.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1396_25
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25591..27795)
DNA (2205bp) protein (735aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4ND94_9GAMM
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AGG87413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1396_26
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27855..29102)
DNA (1248bp) protein (416aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W341_9GAMM
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA nucleotidyltransferase/poly(A) polymerase
SCN18_25_8_15_R2_B_scaffold_1396_27
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29297..30304
DNA (1008bp) protein (336aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPA4_9BACT
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EEF58355.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Alcohol dehydrogenase GroES domain protein
Displaying 27 items

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