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SCN18_25_8_15_R2_B_scaffold_1456

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1456_1
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23..517
DNA (495bp) protein (165aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W028_9GAMM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EIL92819.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA internalization-related competence protein ComEC/Rec2
SCN18_25_8_15_R2_B_scaffold_1456_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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630..1292
DNA (663bp) protein (221aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W027_9GAMM
Biopolymer transport protein {ECO:0000313|EMBL:EIL92818.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
biopolymer transport protein
SCN18_25_8_15_R2_B_scaffold_1456_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1297..1728
DNA (432bp) protein (144aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB5_9GAMM
Biopolymer transport protein {ECO:0000313|EMBL:EIM01307.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
biopolymer transport protein
SCN18_25_8_15_R2_B_scaffold_1456_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1725..3509
DNA (1785bp) protein (595aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN25_9GAMM
lipid A export permease/ATP-binding protein MsbA
SCN18_25_8_15_R2_B_scaffold_1456_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3520..4521
DNA (1002bp) protein (334aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NP94_9GAMM
tetraacyldisaccharide 4''-kinase
SCN18_25_8_15_R2_B_scaffold_1456_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4516..5745)
DNA (1230bp) protein (410aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB8_9GAMM
SCN18_25_8_15_R2_B_scaffold_1456_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5756..7354)
DNA (1599bp) protein (533aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WE50_9GAMM
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:AGG89459.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1456_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7430..8818
DNA (1389bp) protein (463aa)
formimidoylglutamate deiminase (EC:3.5.3.13)
Formimidoylglutamate deiminase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIG5_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1456_9
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8911..9402
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPC3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01315.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1456_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9399..9500
DNA (102bp) protein (34aa)
SCN18_25_8_15_R2_B_scaffold_1456_11
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9529..10824
DNA (1296bp) protein (432aa)
Major facilitator family transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN19_9GAMM
membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1456_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10926..12458
DNA (1533bp) protein (511aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P8_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABJ83271.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_25_8_15_R2_B_scaffold_1456_13
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12542..12997
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPC6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01318.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCN18_25_8_15_R2_B_scaffold_1456_14
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..13509)
DNA (516bp) protein (172aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPC7_9GAMM
O-6-methylguanine DNA methyltransferase
SCN18_25_8_15_R2_B_scaffold_1456_15
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13506..15020)
DNA (1515bp) protein (505aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.21 2.1.1.63)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH75_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCN18_25_8_15_R2_B_scaffold_1456_16
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15250..15915)
DNA (666bp) protein (222aa)
SCN18_25_8_15_R2_B_scaffold_1456_17
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15999..18602
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G626_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99160.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1456_18
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18734..21619
DNA (2886bp) protein (962aa)
Outer membrane receptor for ferrienterochelin and colicins n=8 Tax=Rhodanobacter denitrificans RepID=M4NAP4_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:AGG87579.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor for ferrienterochelin and colicins
SCN18_25_8_15_R2_B_scaffold_1456_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21704..21955
DNA (252bp) protein (84aa)
Displaying 19 items

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