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SCN18_25_8_15_R2_B_scaffold_1688

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1688_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2711)
DNA (2709bp) protein (903aa)
Putative Acriflavin resistance protein n=1 Tax=mine drainage metagenome RepID=E6QBZ7_9ZZZZ
Putative Acriflavin resistance protein {ECO:0000313|EMBL:CBI04723.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acriflavin resistance protein
SCN18_25_8_15_R2_B_scaffold_1688_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2724..3812)
DNA (1089bp) protein (363aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JR33_9GAMM
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:KFZ89625.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
RND family efflux transporter MFP subunit
SCN18_25_8_15_R2_B_scaffold_1688_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3815..5506)
DNA (1692bp) protein (564aa)
RND efflux system, outer membrane lipoprotein, NodT family n=2 Tax=mine drainage metagenome RepID=T1D6Z7_9ZZZZ
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EQD77214.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NodT family RND efflux system outer membrane lipoprotein
SCN18_25_8_15_R2_B_scaffold_1688_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5625..6326
DNA (702bp) protein (234aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CEG60193.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CEG60193.1};; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIV8_METAL
SCN18_25_8_15_R2_B_scaffold_1688_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6349..7746)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW64_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
H+/gluconate symporter family protein
SCN18_25_8_15_R2_B_scaffold_1688_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7900..10188
DNA (2289bp) protein (763aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW63_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:KGI77420.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_1688_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10286..11326
DNA (1041bp) protein (347aa)
Poly (3-hydroxybutyrate) depolymerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW62_9GAMM
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:EIL91453.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative esterase
SCN18_25_8_15_R2_B_scaffold_1688_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11424..14729
DNA (3306bp) protein (1102aa)
Putative two component regulator sensor histidine kinase/response regulator fusion transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA3_9GAMM
Putative two component regulator sensor histidine kinase/response regulator fusion transcriptional regulator {ECO:0000313|EMBL:EIL91452.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_1688_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14757..15458)
DNA (702bp) protein (234aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA2_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGG88678.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_1688_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15644..17401
DNA (1758bp) protein (586aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW5_9GAMM
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL99406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3HB-oligomer hydrolase (3HBOH)
SCN18_25_8_15_R2_B_scaffold_1688_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17496..18380)
DNA (885bp) protein (295aa)
Glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase {ECO:0000313|EMBL:CDM24112.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDM24112.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Glutathione S-transferase protein n=2 Tax=Rhizobium etli RepID=S5S9E1_RHIET
SCN18_25_8_15_R2_B_scaffold_1688_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18501..18722)
DNA (222bp) protein (74aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WFZ8_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIM01245.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
penicillin-binding protein, beta-lactamase class C
Displaying 12 items

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