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SCN18_25_8_15_R2_B_scaffold_95

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Displaying items 1-30 of 233 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_95_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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269..1072
DNA (804bp) protein (268aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
Membrane-associated phospholipid phosphatase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GWC4_9SPHN
PA-phosphatase-like phosphoesterase
SCN18_25_8_15_R2_B_scaffold_95_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1143..4439)
DNA (3297bp) protein (1099aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM80_9SPHN
TonB-dependent receptor-like protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_25_8_15_R2_B_scaffold_95_3
unknown

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comp(4499..5065)
DNA (567bp) protein (189aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_95_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5062..6030)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ19_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated
SCN18_25_8_15_R2_B_scaffold_95_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6036..7025)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L1P5_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_25_8_15_R2_B_scaffold_95_6
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7330..8919
DNA (1590bp) protein (530aa)
Signal transduction histidine-protein kinase BaeS {ECO:0000313|EMBL:AKH44108.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH44108.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Histidine kinase with HAMP domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2K6X5_9BURK
integral membrane sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_95_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8919..9602
DNA (684bp) protein (228aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C143A9
Response regulator ArlR {ECO:0000313|EMBL:AKH44107.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
two-component response regulator protein
SCN18_25_8_15_R2_B_scaffold_95_8
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9719..10393
DNA (675bp) protein (225aa)
PhoB family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E61B3D
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:AKH43944.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
two component transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_95_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10446..13121)
DNA (2676bp) protein (892aa)
TonB-denpendent receptor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000378279C
TonB-dependent receptor {ECO:0000313|EMBL:KHS45567.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_95_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13206..14837)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GE81_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL20753.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_95_11
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15067..15453
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HM46_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL26080.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_95_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15578..17140
DNA (1563bp) protein (521aa)
Transcriptional regulator, CadC n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFJ6_CAUST
transcriptional regulator CadC
Transcriptional regulator, CadC {ECO:0000313|EMBL:ADG09728.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCN18_25_8_15_R2_B_scaffold_95_13
unknown

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17286..17699
DNA (414bp) protein (138aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_95_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17843..18448
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B725EE
Putative secreted protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_25_8_15_R2_B_scaffold_95_15
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18623..19804
DNA (1182bp) protein (394aa)
hypothetical protein BuboB_31508 id=4133801 bin=GWF2_Planctomycete_41_51 species=Burkholderia ubonensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
extracellular repeat-containing protein, HAF family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCN18_25_8_15_R2_B_scaffold_95_16
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20337..20945
DNA (609bp) protein (203aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000313|EMBL:AKH43940.1}; EC=4.2.2.- {ECO:0000313|EMBL:AKH43940.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB30_9SPHN
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_95_17
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20946..21248
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E575
TrbC/VIRB2 family protein {ECO:0000313|EMBL:AKH43939.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_95_18
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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21255..21536
DNA (282bp) protein (94aa)
type VI secretion protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E576
Type VI secretion protein {ECO:0000313|EMBL:KHL26081.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
type VI secretion protein
SCN18_25_8_15_R2_B_scaffold_95_19
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21574..24015
DNA (2442bp) protein (814aa)
type VI secretion protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7D4
Type IV secretion system protein virB4 {ECO:0000313|EMBL:AKH43937.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
type IV secretion system protein B4
SCN18_25_8_15_R2_B_scaffold_95_20
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24012..25205
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB34_9SPHN
Type VI secretion protein {ECO:0000313|EMBL:KHL26787.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_95_21
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25202..25993
DNA (792bp) protein (264aa)
type VI secretion protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD05D2
Type IV secretion system protein virB9 {ECO:0000313|EMBL:AKH43935.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
type IV secretion system protein B9
SCN18_25_8_15_R2_B_scaffold_95_22
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25993..27114
DNA (1122bp) protein (374aa)
Type IV secretion system protein B10, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC51_ERYLH
Type IV secretion system protein virB10 {ECO:0000313|EMBL:AKH43934.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
type IV secretion system protein B10
SCN18_25_8_15_R2_B_scaffold_95_23
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27122..28147
DNA (1026bp) protein (342aa)
type VI secretion protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F5075E
Type VI secretion protein {ECO:0000313|EMBL:KHL26083.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
type IV secretion system protein B11
SCN18_25_8_15_R2_B_scaffold_95_24
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28215..30365
DNA (2151bp) protein (717aa)
Polyphosphate kinase {ECO:0000313|EMBL:AKH43932.1}; EC=2.7.4.1 {ECO:0000313|EMBL:AKH43932.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Polyphosphate kinase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EA01_9SPHN
polyphosphate kinase
SCN18_25_8_15_R2_B_scaffold_95_25
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30362..31873
DNA (1512bp) protein (504aa)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000313|EMBL:AKH43931.1}; EC=3.6.1.40 {ECO:0000313|EMBL:AKH43931.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Exopolyphosphatase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDS7_9SPHN
exopolyphosphatase
SCN18_25_8_15_R2_B_scaffold_95_26
unknown

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31965..32204
DNA (240bp) protein (80aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_95_27
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32266..33732
DNA (1467bp) protein (489aa)
Putative flavin-containing monooxygenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPZ5_9SPHN
Monooxygenase of flavin-binding family {ECO:0000313|EMBL:GAO54609.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
flavin-containing monooxygenase FMO
SCN18_25_8_15_R2_B_scaffold_95_28
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33729..34490
DNA (762bp) protein (254aa)
Nucleotide-utilizing enzyme n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDY2_ERYLH
nucleotide-utilizing enzyme
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCN18_25_8_15_R2_B_scaffold_95_29
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34658..36991
DNA (2334bp) protein (778aa)
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MTX1_9SPHN
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KFL46010.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_95_30
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37053..37553)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6H6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49927.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
Displaying items 1-30 of 233 in total

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